RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
COMMD4-222ENST00000568034 VPS37CA5D8V6 355 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-222ENST00000568034 STX6O43752 255 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 GJB1P08034 283 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 ARP10275 920 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 UBA1P22314 1058 aaKnown RBP20.47■□□□□ 0.87
COMMD4-222ENST00000568034 ANP32AP39687 249 aaKnown RBP20.47■□□□□ 0.87
COMMD4-222ENST00000568034 TTLL4Q14679 1199 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 LY6KQ17RY6 165 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 NLRX1Q86UT6 975 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 COPS5Q92905 334 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 DEFB118Q96PH6 123 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 CRISPLD2Q9H0B8 497 aa20.47■□□□□ 0.87
COMMD4-222ENST00000568034 SLC37A4O43826 429 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 MSCO60682 206 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 ATP9AO75110 1047 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 DUSP11O75319 330 aaKnown RBP20.46■□□□□ 0.87
COMMD4-222ENST00000568034 TXNP10599 105 aaKnown RBP20.46■□□□□ 0.87
COMMD4-222ENST00000568034 KCNA2P16389 499 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 ZNF76P36508 570 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-222ENST00000568034 RESTQ13127 1097 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 MTMR1Q13613 665 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 PKP1Q13835 747 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 LETM2Q2VYF4 491 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 BCAS3Q9H6U6 928 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 KCNH7Q9NS40 1196 aa20.46■□□□□ 0.87
COMMD4-222ENST00000568034 CTAGE5O15320 804 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 ADAMTS4O75173 837 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 TGFB3P10600 412 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 RARBP10826 455 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 NKX3-2P78367 333 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 Q4G0T1 1027 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 PRR16Q569H4 304 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 PPP4R3AQ6IN85 833 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 KCNV1Q6PIU1 500 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 PLA2G4DQ86XP0 818 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
COMMD4-222ENST00000568034 AGO4Q9HCK5 861 aaKnown RBP20.45■□□□□ 0.86
COMMD4-222ENST00000568034 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 SYNRGQ9UMZ2 1314 aa20.45■□□□□ 0.86
COMMD4-222ENST00000568034 DOCK5Q9H7D0 1870 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 MYADML2A6NDP7 307 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 SGPL1O95470 568 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 DDIT3P35638 169 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 GJA8P48165 433 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 TOB1P50616 345 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 SETQ01105 290 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 ARHGAP1Q07960 439 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 ITGB3BPQ13352 177 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 TLK2Q86UE8 772 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 FERMT3Q86UX7 667 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 U2AF1L4Q8WU68 220 aaKnown RBP20.44■□□□□ 0.86
COMMD4-222ENST00000568034 CDHR1Q96JP9 859 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 SENP7Q9BQF6 1050 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 Q9Y3F1 56 aa20.44■□□□□ 0.86
COMMD4-222ENST00000568034 MAFGO15525 162 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 CCNT1O60563 726 aaKnown RBP20.43■□□□□ 0.86
COMMD4-222ENST00000568034 PGK1P00558 417 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 GCFC2P16383 781 aaKnown RBP20.43■□□□□ 0.86
COMMD4-222ENST00000568034 GJA9P57773 515 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 ETNPPLQ8TBG4 499 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 XPNPEP3Q9NQH7 507 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 DDX25Q9UHL0 483 aaKnown RBP20.43■□□□□ 0.86
COMMD4-222ENST00000568034 TELO2Q9Y4R8 837 aa20.43■□□□□ 0.86
COMMD4-222ENST00000568034 MSH4O15457 936 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 DYNC1LI2O43237 492 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-222ENST00000568034 FARP2O94887 1054 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-222ENST00000568034 GGPS1O95749 300 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 GH1P01241 217 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 TRAPPC10P48553 1259 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-222ENST00000568034 NBR1Q14596 966 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 CELF3Q5SZQ8 465 aaKnown RBP20.42■□□□□ 0.86
COMMD4-222ENST00000568034 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 KLHDC9Q8NEP7 349 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 EMID1Q96A84 441 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-222ENST00000568034 KCNMB3Q9NPA1 279 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 PKD2L1Q9P0L9 805 aa20.42■□□□□ 0.86
COMMD4-222ENST00000568034 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
COMMD4-222ENST00000568034 SORBS3O60504 671 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 CST5P28325 142 aaPredicted RBP20.41■□□□□ 0.86
COMMD4-222ENST00000568034 TTC38Q5R3I4 469 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 CCSAPQ6IQ19 270 aaPredicted RBP20.41■□□□□ 0.86
COMMD4-222ENST00000568034 METTL7BQ6UX53 244 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 BRAPQ7Z569 592 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 OR6J1Q8NGC5 347 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 UIMC1Q96RL1 719 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 NAP1L4Q99733 375 aaKnown RBP20.41■□□□□ 0.86
COMMD4-222ENST00000568034 TMEM106CQ9BVX2 250 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 ZDHHC9Q9Y397 364 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 NFASCO94856 1347 aa20.41■□□□□ 0.86
COMMD4-222ENST00000568034 ZSCAN22P10073 491 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-222ENST00000568034 NEDD9Q14511 834 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms