RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TGFB3P10600 412 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 MYCLP12524 364 aaPredicted RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 CSF2RAP15509 400 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 CCND2P30279 289 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 HOXA13P31271 388 aaPredicted RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 CYP2C18P33260 490 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 EPHB4P54760 987 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 PSMC6P62333 389 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 PTPN11Q06124 597 aaPredicted RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 ARHGAP1Q07960 439 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 LAMC2Q13753 1193 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 KRT32Q14532 448 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 PGM5Q15124 567 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 DGKDQ16760 1214 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 LY6KQ17RY6 165 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 TSGA10IPQ3SY00 556 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 ZNF697Q5TEC3 545 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 PSRC1Q6PGN9 363 aaPredicted RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 Q7L0L9 218 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 VSIG10LQ86VR7 867 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 SGMS1Q86VZ5 419 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 SRBD1Q8N5C6 995 aaKnown RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 PPTC7Q8NI37 304 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 AFG1LQ8WV93 481 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 COPS5Q92905 334 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 NEK1Q96PY6 1258 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLK3-219ENST00000567805 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 MYL10Q9BUA6 226 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 NOC4LQ9BVI4 516 aaKnown RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 TRPV6Q9H1D0 765 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 DDX41Q9UJV9 622 aaKnown RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 SLC12A7Q9Y666 1083 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 KAT6AQ92794 2004 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 XIRP2A4UGR9 3374 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 TMEM265A0A087WTH1 108 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 PLEKHA8P1O95397 391 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 HMGB1P09429 215 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 EXOSC10Q01780 885 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 COL9A3Q14050 684 aaPredicted RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 FAM47CQ5HY64 1035 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 RASIP1Q5U651 963 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 MYSM1Q5VVJ2 828 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 TMTC3Q6ZXV5 915 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 DHX32Q7L7V1 743 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 SESTD1Q86VW0 696 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 FCHSD1Q86WN1 690 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 MICU3Q86XE3 530 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 DHX37Q8IY37 1157 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 RPUSD2Q8IZ73 545 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 FANCBQ8NB91 859 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 IL31RAQ8NI17 732 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 PIBF1Q8WXW3 757 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 CUL5Q93034 780 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 KATNAL1Q9BW62 490 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 LRRC2Q9BYS8 371 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 MTIF3Q9H2K0 278 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 IL23AQ9NPF7 189 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 TRMT13Q9NUP7 481 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 RBM28Q9NW13 759 aaKnown RBP5.52□□□□□ -1.53
CLK3-219ENST00000567805 STXBP5LQ9Y2K9 1186 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 PTPRSQ13332 1948 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 VCANP13611 3396 aa5.52□□□□□ -1.53
CLK3-219ENST00000567805 UMODL1Q5DID0 1318 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 SPTBN5Q9NRC6 3674 aaKnown RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 MEIS2O14770 477 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 ZBTB43O43298 467 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 PPFIA4O75335 1185 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 RGS20O76081 388 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 REC8O95072 547 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 GGPS1O95749 300 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 F2P00734 622 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 FGBP02675 491 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 NEFLP07196 543 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 PFKMP08237 780 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 ACRP10323 421 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CYP2C9P11712 490 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 HOXD8P13378 290 aaPredicted RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 RXRAP19793 462 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 UBA1P22314 1058 aaKnown RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 ICAM3P32942 547 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 RFC2P35250 354 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 RCAN1P53805 252 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 CCL23P55773 120 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 MRPS9P82933 396 aaKnown RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 BFSP2Q13515 415 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 RTN1Q16799 776 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 ADCK5Q3MIX3 580 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 GNPTABQ3T906 1256 aa5.51□□□□□ -1.53
CLK3-219ENST00000567805 VARS2Q5ST30 1063 aaKnown RBP5.51□□□□□ -1.53
CLK3-219ENST00000567805 PCNX4Q63HM2 1172 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms