RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	CLIC6	Q96NY7	704 aa		10.61	□□□□□ -0.71
FANCA-223	ENST00000567284	ZNF577	Q9BSK1	485 aa		10.61	□□□□□ -0.71
FANCA-223	ENST00000567284	PDGFC	Q9NRA1	345 aa		10.61	□□□□□ -0.71
FANCA-223	ENST00000567284	VWA3A	A6NCI4	1184 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	MEIS1	O00470	390 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	ADCY3	O60266	1144 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	PRPF40A	O75400	957 aa	Known RBP	10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	STAM2	O75886	525 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	RGS20	O76081	388 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	BMP15	O95972	392 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	HOXC6	P09630	235 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	CNGA1	P29973	690 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	TEC	P42680	631 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	CTCF	P49711	727 aa	Predicted RBP	10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	ATP2C1	P98194	919 aa	Predicted RBP	10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SP4	Q02446	784 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	GRIN1	Q05586	938 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	TRIM32	Q13049	653 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SEMA3F	Q13275	785 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	ACVR2B	Q13705	512 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SLC39A14	Q15043	492 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	LY6K	Q17RY6	165 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	CSPP1	Q1MSJ5	1256 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SPECC1	Q5M775	1068 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	MFSD14C	Q5VZR4	134 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	OLFML2B	Q68BL8	750 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	MAMDC4	Q6UXC1	1216 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	DTHD1	Q6ZMT9	781 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	OTOP1	Q7RTM1	612 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	NIPA1	Q7RTP0	329 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	C4orf32	Q8N8J7	132 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	MORC4	Q8TE76	937 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	TRIB2	Q92519	343 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	LENG9	Q96B70	501 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	GPRASP2	Q96D09	838 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	MBOAT7	Q96N66	472 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	AGO4	Q9HCK5	861 aa	Known RBP	10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	KCNH7	Q9NS40	1196 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	RCOR1	Q9UKL0	485 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	FRMPD3	Q5JV73	1810 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	KAT6A	Q92794	2004 aa		10.6	□□□□□ -0.71
FANCA-223	ENST00000567284	SYNGAP1	Q96PV0	1343 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	LOC102724159	A0A0B4J2E5	919 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	GOLGA6L4	A6NEF3	574 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	GOLGA6L22	H0YM25	854 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	CHMP2A	O43633	222 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	GAS7	O60861	476 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	ATP9A	O75110	1047 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	GNRH1	P01148	92 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	PTGS1	P23219	599 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	ADCYAP1R1	P41586	468 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	ORC2	Q13416	577 aa	Predicted RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	PWP2	Q15269	919 aa	Known RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	IL17A	Q16552	155 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	TMEM266	Q2M3C6	531 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	TMEM63B	Q5T3F8	832 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	GJC2	Q5T442	439 aa	Predicted RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	LRCH2	Q5VUJ6	765 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	NCAPH2	Q6IBW4	605 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	SLFN12	Q8IYM2	578 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	KRI1	Q8N9T8	703 aa	Known RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	ETNPPL	Q8TBG4	499 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	KCNG4	Q8TDN1	519 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	HAS1	Q92839	578 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	COPS5	Q92905	334 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	INPP4A	Q96PE3	977 aa	Predicted RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	MTMR9	Q96QG7	549 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	SDF4	Q9BRK5	362 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	TEKT3	Q9BXF9	490 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	ABHD16B	Q9H3Z7	469 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	BCAS3	Q9H6U6	928 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	TTC12	Q9H892	705 aa	Predicted RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	VTA1	Q9NP79	307 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	FBXO2	Q9UK22	296 aa	Predicted RBP	10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	PCDHA7	Q9UN72	937 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	PTCH2	Q9Y6C5	1203 aa		10.59	□□□□□ -0.71
FANCA-223	ENST00000567284	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	SPATA31C2	B4DYI2	1134 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	IPO5	O00410	1097 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	LAD1	O00515	517 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	PPP6R2	O75170	966 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	GADD45B	O75293	160 aa	Predicted RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	ARIH2	O95376	493 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	MYC	P01106	439 aa	Predicted RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	TXN	P10599	105 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	XRCC5	P13010	732 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	SP2	Q02086	613 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	ITGB3BP	Q13352	177 aa	Predicted RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	IRF5	Q13568	498 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	TTLL4	Q14679	1199 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	ZRSR1	Q15695	479 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	CCDC144B	Q3MJ40	725 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	TAPT1	Q6NXT6	567 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	TRMT44	Q8IYL2	757 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	MSL3	Q8N5Y2	521 aa	Known RBP	10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	SLC5A5	Q92911	643 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	CDHR1	Q96JP9	859 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	FAM20A	Q96MK3	541 aa		10.58	□□□□□ -0.72
FANCA-223	ENST00000567284	CSRNP2	Q9H175	543 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms