RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SNPHO15079 494 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 INHAP05111 366 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 NR3C2P08235 984 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 SYT1P21579 422 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 TNFRSF25Q93038 417 aa13.08□□□□□ -0.32
KARS-207ENST00000566560 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.32
KARS-207ENST00000566560 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 STX6O43752 255 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
KARS-207ENST00000566560 IGHA2P01877 340 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 CYBAP13498 195 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 TRIM32Q13049 653 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 STXBP2Q15833 593 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 INF2Q27J81 1249 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 TBCKQ8TEA7 893 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 MCOLN1Q9GZU1 580 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
KARS-207ENST00000566560 STAM2O75886 525 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
KARS-207ENST00000566560 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 VSIG10LQ86VR7 867 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 NRBP1Q9UHY1 535 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
KARS-207ENST00000566560 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
KARS-207ENST00000566560 U2AF2P26368 475 aaKnown RBP eCLIP13.05□□□□□ -0.32
KARS-207ENST00000566560 ZNF76P36508 570 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 MRPS9P82933 396 aaKnown RBP13.05□□□□□ -0.32
KARS-207ENST00000566560 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
KARS-207ENST00000566560 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 INPP4AQ96PE3 977 aaPredicted RBP13.05□□□□□ -0.32
KARS-207ENST00000566560 RTEL1Q9NZ71 1219 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 NOL7Q9UMY1 257 aaKnown RBP13.05□□□□□ -0.32
KARS-207ENST00000566560 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 DOCK5Q9H7D0 1870 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 HTTP42858 3142 aa13.05□□□□□ -0.32
KARS-207ENST00000566560 FAM86B1E9PN63 330 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 TDP2O95551 362 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 CYP3A4P08684 503 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 FAM86B2P0C5J1 330 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 ZNF865P0CJ78 1059 aaPredicted RBP13.04□□□□□ -0.32
KARS-207ENST00000566560 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
KARS-207ENST00000566560 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
KARS-207ENST00000566560 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
KARS-207ENST00000566560 MTMR1Q13613 665 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 CEP55Q53EZ4 464 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 BRAPQ7Z569 592 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 NLRX1Q86UT6 975 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 TRPV1Q8NER1 839 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 ZNF333Q96JL9 665 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 UBIAD1Q9Y5Z9 338 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
KARS-207ENST00000566560 FIBPO43427 364 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 EVI5O60447 810 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 RGS20O76081 388 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 AKR1A1P14550 325 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 ITGB5P18084 799 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 CNGA1P29973 690 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 CIITAP33076 1130 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 USP11P51784 963 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 RESTQ13127 1097 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 PKP1Q13835 747 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 PRR16Q569H4 304 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 TAPT1Q6NXT6 567 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 GPRASP2Q96D09 838 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 NAP1L4Q99733 375 aaKnown RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
KARS-207ENST00000566560 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
KARS-207ENST00000566560 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
KARS-207ENST00000566560 IGLV3-22A0A075B6J6 115 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 SEPT4O43236 478 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms