RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 SP2Q02086 613 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 RESTQ13127 1097 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 SAFBQ15424 915 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDH13-208ENST00000566333 CEP55Q53EZ4 464 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 IFFO2Q5TF58 517 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 MOXD1Q6UVY6 613 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 SEPT14Q6ZU15 432 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 NIPA1Q7RTP0 329 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 NEK8Q86SG6 692 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 SCFD2Q8WU76 684 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 GPRASP2Q96D09 838 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 ABHD8Q96I13 439 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 MXRA8Q9BRK3 442 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 JADE2Q9NQC1 790 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 RTEL1Q9NZ71 1219 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 DDX20Q9UHI6 824 aaKnown RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 RBM19Q9Y4C8 960 aaKnown RBP9.3□□□□□ -0.92
CDH13-208ENST00000566333 SYNRGQ9UMZ2 1314 aa9.3□□□□□ -0.92
CDH13-208ENST00000566333 LOXHD1Q8IVV2 1947 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 MYADML2A6NDP7 307 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 SPATA31C2B4DYI2 1134 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 FIBPO43427 364 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 ADAMTS4O75173 837 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 ARP10275 920 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 TOB1P50616 345 aaPredicted RBP9.29□□□□□ -0.92
CDH13-208ENST00000566333 USP11P51784 963 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 NKX3-2P78367 333 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
CDH13-208ENST00000566333 ARHGAP1Q07960 439 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 ITGB3BPQ13352 177 aaPredicted RBP9.29□□□□□ -0.92
CDH13-208ENST00000566333 MTMR1Q13613 665 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 NBR1Q14596 966 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 DUSP28Q4G0W2 176 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 ANO1Q5XXA6 986 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 TLK2Q86UE8 772 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 FERMT3Q86UX7 667 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 ETNPPLQ8TBG4 499 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 COPS5Q92905 334 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 RNF208Q9H0X6 261 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 UPF3AQ9H1J1 476 aaKnown RBP9.29□□□□□ -0.92
CDH13-208ENST00000566333 BCAS3Q9H6U6 928 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 KCNH7Q9NS40 1196 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
CDH13-208ENST00000566333 TELO2Q9Y4R8 837 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 KAT6AQ92794 2004 aa9.29□□□□□ -0.92
CDH13-208ENST00000566333 PDE4DIPQ5VU43 2346 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 MSH4O15457 936 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 MSCO60682 206 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 ATP9AO75110 1047 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 DUSP11O75319 330 aaKnown RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 FARP2O94887 1054 aaPredicted RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 GJB1P08034 283 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 TXNP10599 105 aaKnown RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 CNGA1P29973 690 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 MNX1P50219 401 aaPredicted RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 TNFAIP2Q03169 654 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 TTLL4Q14679 1199 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 LY6KQ17RY6 165 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 LETM2Q2VYF4 491 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 GNPTABQ3T906 1256 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 Q4G0T1 1027 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 PRR16Q569H4 304 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 MCTP1Q6DN14 999 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 PPP4R3AQ6IN85 833 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 DEFB118Q96PH6 123 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 AGO4Q9HCK5 861 aaKnown RBP9.28□□□□□ -0.92
CDH13-208ENST00000566333 KCNMB3Q9NPA1 279 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 FAM184BQ9ULE4 1060 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 ZDHHC9Q9Y397 364 aa9.28□□□□□ -0.92
CDH13-208ENST00000566333 SIP14410 1827 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 NKRFO15226 690 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDH13-208ENST00000566333 DHX15O43143 795 aaKnown RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 CCNT1O60563 726 aaKnown RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 BRD1O95696 1058 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 GGPS1O95749 300 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 PGK1P00558 417 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 ZSCAN22P10073 491 aaPredicted RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 TGFB3P10600 412 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 RARBP10826 455 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 HOXD8P13378 290 aaPredicted RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 GCFC2P16383 781 aaKnown RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 CST5P28325 142 aaPredicted RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 GJA8P48165 433 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 TRAPPC10P48553 1259 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 GJA9P57773 515 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 TTC38Q5R3I4 469 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 CELF3Q5SZQ8 465 aaKnown RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 IQSEC1Q6DN90 963 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 CCSAPQ6IQ19 270 aaPredicted RBP9.27□□□□□ -0.93
CDH13-208ENST00000566333 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 KCNV1Q6PIU1 500 aa9.27□□□□□ -0.93
CDH13-208ENST00000566333 BRAPQ7Z569 592 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms