RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SPATA32Q96LK8 384 aa8.81□□□□□ -1
CDH1-208ENST00000565810 INPP4AQ96PE3 977 aaPredicted RBP8.81□□□□□ -1
CDH1-208ENST00000565810 SDF4Q9BRK5 362 aa8.81□□□□□ -1
CDH1-208ENST00000565810 RAB34Q9BZG1 259 aa8.81□□□□□ -1
CDH1-208ENST00000565810 WDR11Q9BZH6 1224 aa8.81□□□□□ -1
CDH1-208ENST00000565810 KCNH7Q9NS40 1196 aa8.81□□□□□ -1
CDH1-208ENST00000565810 NRBP1Q9UHY1 535 aa8.81□□□□□ -1
CDH1-208ENST00000565810 RCOR1Q9UKL0 485 aa8.81□□□□□ -1
CDH1-208ENST00000565810 ASTN1O14525 1302 aa8.8□□□□□ -1
CDH1-208ENST00000565810 IGLV3-22A0A075B6J6 115 aa8.8□□□□□ -1
CDH1-208ENST00000565810 GOLGA6L4A6NEF3 574 aa8.8□□□□□ -1
CDH1-208ENST00000565810 SPATA31C2B4DYI2 1134 aa8.8□□□□□ -1
CDH1-208ENST00000565810 IPO5O00410 1097 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 WNT7AO00755 349 aa8.8□□□□□ -1
CDH1-208ENST00000565810 MSH4O15457 936 aa8.8□□□□□ -1
CDH1-208ENST00000565810 SLC37A4O43826 429 aa8.8□□□□□ -1
CDH1-208ENST00000565810 GAS7O60861 476 aa8.8□□□□□ -1
CDH1-208ENST00000565810 HMGCRP04035 888 aa8.8□□□□□ -1
CDH1-208ENST00000565810 ARP10275 920 aa8.8□□□□□ -1
CDH1-208ENST00000565810 MARCKSP29966 332 aaPredicted RBP8.8□□□□□ -1
CDH1-208ENST00000565810 CYP2C19P33261 490 aa8.8□□□□□ -1
CDH1-208ENST00000565810 PRPHP41219 470 aa8.8□□□□□ -1
CDH1-208ENST00000565810 TXKP42681 527 aa8.8□□□□□ -1
CDH1-208ENST00000565810 ME1P48163 572 aa8.8□□□□□ -1
CDH1-208ENST00000565810 ATP2C1P98194 919 aaPredicted RBP8.8□□□□□ -1
CDH1-208ENST00000565810 NEDD9Q14511 834 aa8.8□□□□□ -1
CDH1-208ENST00000565810 CCL14Q16627 93 aa8.8□□□□□ -1
CDH1-208ENST00000565810 ARL6IP4Q66PJ3 421 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 IQSEC1Q6DN90 963 aa8.8□□□□□ -1
CDH1-208ENST00000565810 CTU1Q7Z7A3 348 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 KRI1Q8N9T8 703 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 LINC00301Q8NCQ3 95 aa8.8□□□□□ -1
CDH1-208ENST00000565810 LEO1Q8WVC0 666 aaPredicted RBP8.8□□□□□ -1
CDH1-208ENST00000565810 FERMT2Q96AC1 680 aa8.8□□□□□ -1
CDH1-208ENST00000565810 RIT2Q99578 217 aa8.8□□□□□ -1
CDH1-208ENST00000565810 SENP7Q9BQF6 1050 aa8.8□□□□□ -1
CDH1-208ENST00000565810 TEKT3Q9BXF9 490 aa8.8□□□□□ -1
CDH1-208ENST00000565810 FTOQ9C0B1 505 aaKnown RBP eCLIP8.8□□□□□ -1
CDH1-208ENST00000565810 TMEM60Q9H2L4 133 aa8.8□□□□□ -1
CDH1-208ENST00000565810 AGO4Q9HCK5 861 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 KCNMB3Q9NPA1 279 aa8.8□□□□□ -1
CDH1-208ENST00000565810 TBC1D22BQ9NU19 505 aa8.8□□□□□ -1
CDH1-208ENST00000565810 FLRT1Q9NZU1 646 aa8.8□□□□□ -1
CDH1-208ENST00000565810 PCDHA12Q9UN75 941 aa8.8□□□□□ -1
CDH1-208ENST00000565810 DDX49Q9Y6V7 483 aaKnown RBP8.8□□□□□ -1
CDH1-208ENST00000565810 MORC2Q9Y6X9 1032 aaPredicted RBP8.8□□□□□ -1
CDH1-208ENST00000565810 NKRFO15226 690 aaKnown RBP eCLIP8.79□□□□□ -1
CDH1-208ENST00000565810 TXNP10599 105 aaKnown RBP8.79□□□□□ -1
CDH1-208ENST00000565810 CNGA1P29973 690 aa8.79□□□□□ -1
CDH1-208ENST00000565810 GRK4P32298 578 aa8.79□□□□□ -1
CDH1-208ENST00000565810 TECP42680 631 aa8.79□□□□□ -1
CDH1-208ENST00000565810 CAP1Q01518 475 aa8.79□□□□□ -1
CDH1-208ENST00000565810 PTPAQ15257 358 aa8.79□□□□□ -1
CDH1-208ENST00000565810 PKN2Q16513 984 aaKnown RBP8.79□□□□□ -1
CDH1-208ENST00000565810 PRAMEF19Q5SWL8 479 aa8.79□□□□□ -1
CDH1-208ENST00000565810 LRCH2Q5VUJ6 765 aa8.79□□□□□ -1
CDH1-208ENST00000565810 TAPT1Q6NXT6 567 aa8.79□□□□□ -1
CDH1-208ENST00000565810 CLEC17AQ6ZS10 378 aa8.79□□□□□ -1
CDH1-208ENST00000565810 C4orf32Q8N8J7 132 aa8.79□□□□□ -1
CDH1-208ENST00000565810 ETNPPLQ8TBG4 499 aa8.79□□□□□ -1
CDH1-208ENST00000565810 TRIB2Q92519 343 aa8.79□□□□□ -1
CDH1-208ENST00000565810 SLC5A5Q92911 643 aa8.79□□□□□ -1
CDH1-208ENST00000565810 LENG9Q96B70 501 aa8.79□□□□□ -1
CDH1-208ENST00000565810 MTMR9Q96QG7 549 aa8.79□□□□□ -1
CDH1-208ENST00000565810 TTC12Q9H892 705 aaPredicted RBP8.79□□□□□ -1
CDH1-208ENST00000565810 MLXIPQ9HAP2 919 aa8.79□□□□□ -1
CDH1-208ENST00000565810 PKD2L1Q9P0L9 805 aa8.79□□□□□ -1
CDH1-208ENST00000565810 DDX41Q9UJV9 622 aaKnown RBP8.79□□□□□ -1
CDH1-208ENST00000565810 FAM184BQ9ULE4 1060 aa8.79□□□□□ -1
CDH1-208ENST00000565810 PTPN22Q9Y2R2 807 aa8.79□□□□□ -1
CDH1-208ENST00000565810 SRPRBQ9Y5M8 271 aaKnown RBP8.79□□□□□ -1
CDH1-208ENST00000565810 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
CDH1-208ENST00000565810 STK24Q9Y6E0 443 aa8.79□□□□□ -1
CDH1-208ENST00000565810 PARP14Q460N5 1801 aa8.79□□□□□ -1
CDH1-208ENST00000565810 NFASCO94856 1347 aa8.79□□□□□ -1
CDH1-208ENST00000565810 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
CDH1-208ENST00000565810 RBM47A0AV96 593 aaKnown RBP8.78□□□□□ -1
CDH1-208ENST00000565810 VWA3AA6NCI4 1184 aa8.78□□□□□ -1
CDH1-208ENST00000565810 DDX39AO00148 427 aaKnown RBP8.78□□□□□ -1
CDH1-208ENST00000565810 CUTAO60888 179 aa8.78□□□□□ -1
CDH1-208ENST00000565810 ATP9AO75110 1047 aa8.78□□□□□ -1
CDH1-208ENST00000565810 RGS20O76081 388 aa8.78□□□□□ -1
CDH1-208ENST00000565810 ZNF865P0CJ78 1059 aaPredicted RBP8.78□□□□□ -1
CDH1-208ENST00000565810 PRKAR2AP13861 404 aaKnown RBP8.78□□□□□ -1
CDH1-208ENST00000565810 AKR1A1P14550 325 aa8.78□□□□□ -1
CDH1-208ENST00000565810 ELNP15502 786 aa8.78□□□□□ -1
CDH1-208ENST00000565810 LONP1P36776 959 aaKnown RBP8.78□□□□□ -1
CDH1-208ENST00000565810 TXLNAP40222 546 aa8.78□□□□□ -1
CDH1-208ENST00000565810 ADCYAP1R1P41586 468 aa8.78□□□□□ -1
CDH1-208ENST00000565810 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
CDH1-208ENST00000565810 KRT76Q01546 638 aa8.78□□□□□ -1
CDH1-208ENST00000565810 TNFAIP2Q03169 654 aa8.78□□□□□ -1
CDH1-208ENST00000565810 LAMC2Q13753 1193 aa8.78□□□□□ -1
CDH1-208ENST00000565810 PDIA5Q14554 519 aa8.78□□□□□ -1
CDH1-208ENST00000565810 LY6KQ17RY6 165 aa8.78□□□□□ -1
CDH1-208ENST00000565810 CCDC144BQ3MJ40 725 aa8.78□□□□□ -1
CDH1-208ENST00000565810 CYFIP1Q7L576 1253 aa8.78□□□□□ -1
CDH1-208ENST00000565810 DHX37Q8IY37 1157 aaKnown RBP8.78□□□□□ -1
CDH1-208ENST00000565810 ERMNQ8TAM6 284 aa8.78□□□□□ -1
CDH1-208ENST00000565810 HAS1Q92839 578 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms