RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 SLC4A7Q9Y6M7 1214 aa22.94■■□□□ 1.26
CLN6-206ENST00000565471 SCN5AQ14524 2016 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 MRPS9P82933 396 aaKnown RBP22.93■■□□□ 1.26
CLN6-206ENST00000565471 SP2Q02086 613 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 MFSD10Q14728 455 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 DEFB128Q7Z7B8 93 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 C7orf31Q8N865 590 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 SMARCC2Q8TAQ2 1214 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 AFAP1L1Q8TED9 768 aa22.93■■□□□ 1.26
CLN6-206ENST00000565471 INPP4AQ96PE3 977 aaPredicted RBP22.93■■□□□ 1.26
CLN6-206ENST00000565471 CDC45O75419 566 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 ZNF286BP0CG31 522 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 ACTN1P12814 892 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 RXRAP19793 462 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 ICAM3P32942 547 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 RBL2Q08999 1139 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 KIAA0753Q2KHM9 967 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 HSDL1Q3SXM5 330 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 FANCBQ8NB91 859 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 NEK1Q96PY6 1258 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 HDAC6Q9UBN7 1215 aa22.92■■□□□ 1.26
CLN6-206ENST00000565471 ZBBXA8MT70 800 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 MEIS2O14770 477 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 TSGA10IPQ3SY00 556 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 XRRA1Q6P2D8 792 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 TMTC3Q6ZXV5 915 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.91■■□□□ 1.26
CLN6-206ENST00000565471 GPKOWQ92917 476 aaPredicted RBP eCLIP22.91■■□□□ 1.26
CLN6-206ENST00000565471 ZFP91Q96JP5 570 aaPredicted RBP22.91■■□□□ 1.26
CLN6-206ENST00000565471 ALG1Q9BT22 464 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 LRRC2Q9BYS8 371 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 MLXIPQ9HAP2 919 aa22.91■■□□□ 1.26
CLN6-206ENST00000565471 GBF1Q92538 1859 aa22.9■■□□□ 1.26
CLN6-206ENST00000565471 DLL1O00548 723 aa22.9■■□□□ 1.26
CLN6-206ENST00000565471 PCNX4Q63HM2 1172 aa22.9■■□□□ 1.26
CLN6-206ENST00000565471 USP17L6PQ6QN14 398 aa22.9■■□□□ 1.26
CLN6-206ENST00000565471 CMTR1Q8N1G2 835 aaKnown RBP22.9■■□□□ 1.26
CLN6-206ENST00000565471 DHX38Q92620 1227 aaKnown RBP22.9■■□□□ 1.26
CLN6-206ENST00000565471 SPATA31C2B4DYI2 1134 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 FIBPO43427 364 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 PARNO95453 639 aaKnown RBP22.89■■□□□ 1.25
CLN6-206ENST00000565471 SELPP16109 830 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 ATP2A2P16615 1042 aaKnown RBP22.89■■□□□ 1.25
CLN6-206ENST00000565471 EXOSC10Q01780 885 aaKnown RBP22.89■■□□□ 1.25
CLN6-206ENST00000565471 NEDD9Q14511 834 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 SYNE3Q6ZMZ3 975 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 MICU3Q86XE3 530 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 C16orf70Q9BSU1 422 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 YBX2Q9Y2T7 364 aaKnown RBP22.89■■□□□ 1.25
CLN6-206ENST00000565471 PCDHA11Q9Y5I1 949 aa22.89■■□□□ 1.25
CLN6-206ENST00000565471 TRIP12Q14669 1992 aaPredicted RBP22.89■■□□□ 1.25
CLN6-206ENST00000565471 SORBS3O60504 671 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 SEMA3FQ13275 785 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 PTK7Q13308 1070 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 KRT32Q14532 448 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 APOA5Q6Q788 366 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 METTL7BQ6UX53 244 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 LRRC8DQ7L1W4 858 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 DHX32Q7L7V1 743 aaKnown RBP22.88■■□□□ 1.25
CLN6-206ENST00000565471 RAB11FIP4Q86YS3 637 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 SLC9A7Q96T83 725 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 FTOQ9C0B1 505 aaKnown RBP eCLIP22.88■■□□□ 1.25
CLN6-206ENST00000565471 NKX2-4Q9H2Z4 354 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 PSTPIP2Q9H939 334 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 SLC28A3Q9HAS3 691 aa22.88■■□□□ 1.25
CLN6-206ENST00000565471 BAIAP3O94812 1187 aa22.87■■□□□ 1.25
CLN6-206ENST00000565471 RASEFQ8IZ41 740 aa22.87■■□□□ 1.25
CLN6-206ENST00000565471 PHOSPHO2Q8TCD6 241 aa22.87■■□□□ 1.25
CLN6-206ENST00000565471 RBM28Q9NW13 759 aaKnown RBP22.87■■□□□ 1.25
CLN6-206ENST00000565471 RTEL1Q9NZ71 1219 aa22.87■■□□□ 1.25
CLN6-206ENST00000565471 NOP56O00567 594 aaKnown RBP22.86■■□□□ 1.25
CLN6-206ENST00000565471 LGALS2P05162 132 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 CKBP12277 381 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 RABGGTBP53611 331 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 NLRX1Q86UT6 975 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 CCDC82Q8N4S0 544 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 GAS2L1Q99501 681 aaPredicted RBP22.86■■□□□ 1.25
CLN6-206ENST00000565471 SENP7Q9BQF6 1050 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 BCAS3Q9H6U6 928 aa22.86■■□□□ 1.25
CLN6-206ENST00000565471 H3BRB1 525 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 HMGB1P09429 215 aaKnown RBP22.85■■□□□ 1.25
CLN6-206ENST00000565471 GPNMBQ14956 572 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 TRIM71Q2Q1W2 868 aaKnown RBP22.85■■□□□ 1.25
CLN6-206ENST00000565471 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 CYFIP1Q7L576 1253 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 TEX2Q8IWB9 1127 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 USP26Q9BXU7 913 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 PRDM12Q9H4Q4 367 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 TUT1Q9H6E5 874 aaKnown RBP22.85■■□□□ 1.25
CLN6-206ENST00000565471 TET1Q8NFU7 2136 aa22.85■■□□□ 1.25
CLN6-206ENST00000565471 CNTNAP5Q8WYK1 1306 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 hCG_1642624A0A1W2PR95 340 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 CXCL10P02778 98 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 HOXC8P31273 242 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 GIMAP8Q8ND71 665 aaPredicted RBP22.84■■□□□ 1.25
CLN6-206ENST00000565471 GPRASP2Q96D09 838 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 CDHR1Q96JP9 859 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 TCEANC2Q96MN5 208 aa22.84■■□□□ 1.25
CLN6-206ENST00000565471 GPR20Q99678 358 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms