RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 STAM2O75886 525 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 CKBP12277 381 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SELPP16109 830 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 KCNJ6P48051 423 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 FGD1P98174 961 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SP4Q02446 784 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 GHRHRQ02643 423 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 PTK7Q13308 1070 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 NEDD9Q14511 834 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 UTP14CQ5TAP6 766 aaKnown RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 PPP2R2DQ66LE6 453 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 LRRC8DQ7L1W4 858 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 CENPQQ7L2Z9 268 aaPredicted RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 CYFIP1Q7L576 1253 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 NLRX1Q86UT6 975 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SESTD1Q86VW0 696 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 FANCBQ8NB91 859 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 IL31RAQ8NI17 732 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 CAGE1Q8TC20 777 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 PHOSPHO2Q8TCD6 241 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 AFAP1L1Q8TED9 768 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 GPKOWQ92917 476 aaPredicted RBP eCLIP7.39□□□□□ -1.23
TCF4-228ENST00000565393 NEK1Q96PY6 1258 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 SPZ1Q9BXG8 430 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 COL25A1Q9BXS0 654 aaPredicted RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 USP26Q9BXU7 913 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 LRRC2Q9BYS8 371 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 BCAS3Q9H6U6 928 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 GTF2IRD1Q9UHL9 959 aa7.39□□□□□ -1.23
TCF4-228ENST00000565393 NAP1L2Q9ULW6 460 aaPredicted RBP7.39□□□□□ -1.23
TCF4-228ENST00000565393 C17orf102A2RUQ5 167 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 HAS3O00219 553 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 RFXAPO00287 272 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 FIBPO43427 364 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 TLL1O43897 1013 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 PLEKHA8P1O95397 391 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 PARNO95453 639 aaKnown RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 GNAT1P11488 350 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 UBA1P22314 1058 aaKnown RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 THPOP40225 353 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 LIFRP42702 1097 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 MRPS9P82933 396 aaKnown RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 IKBKEQ14164 716 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 SKIV2LQ15477 1246 aaKnown RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 ZNF618Q5T7W0 954 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 HEATR3Q7Z4Q2 680 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 HERC6Q8IVU3 1022 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 MICALL1Q8N3F8 863 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 ATP6V0A1Q93050 837 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 C16orf70Q9BSU1 422 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 RNPEPQ9H4A4 650 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 SETD4Q9NVD3 440 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 V9GY48 417 aaPredicted RBP7.38□□□□□ -1.23
TCF4-228ENST00000565393 BRCA2P51587 3418 aa7.38□□□□□ -1.23
TCF4-228ENST00000565393 SMCHD1A6NHR9 2005 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PLXNA1Q9UIW2 1896 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 FRMPD3Q5JV73 1810 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 ABHD14A-ACY1A0A1B0GW23 586 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 RSPH10B2B2RC85 870 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 MEIS2O14770 477 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 BAIAP3O94812 1187 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 F2P00734 622 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 CA3P07451 260 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 RSPH10BP0C881 870 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 ICAM3P32942 547 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 ADGRE1Q14246 886 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 BMP2KLQ5H9B9 411 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PCNX4Q63HM2 1172 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 CNKSR3Q6P9H4 555 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 TMCO2Q7Z6W1 182 aaPredicted RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 GIMAP8Q8ND71 665 aaPredicted RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 ARNTL2Q8WYA1 636 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 DHX38Q92620 1227 aaKnown RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 INPP4AQ96PE3 977 aaPredicted RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 SLC9A7Q96T83 725 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PRDM6Q9NQX0 595 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PKD2L1Q9P0L9 805 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PCDHA6Q9UN73 950 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PCDHA8Q9Y5H6 950 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
TCF4-228ENST00000565393 TRIOBPQ9H2D6 2365 aa7.37□□□□□ -1.23
TCF4-228ENST00000565393 PIK3CDO00329 1044 aa7.36□□□□□ -1.23
TCF4-228ENST00000565393 MAFGO15525 162 aa7.36□□□□□ -1.23
TCF4-228ENST00000565393 TREHO43280 583 aa7.36□□□□□ -1.23
TCF4-228ENST00000565393 ZBTB43O43298 467 aa7.36□□□□□ -1.23
TCF4-228ENST00000565393 GTPBP6O43824 516 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms