RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TPRNQ4KMQ1 711 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 ANKRD35Q8N283 1001 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 CRYGNQ8WXF5 182 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 TAAR1Q96RJ0 339 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 CYP39A1Q9NYL5 469 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-205ENST00000564899 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
SF3B3-205ENST00000564899 EDIL3O43854 480 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 CYP3A4P08684 503 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 OR52Z1P0C646 297 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 PPP4R3AQ6IN85 833 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 MOXD1Q6UVY6 613 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3B3-205ENST00000564899 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
SF3B3-205ENST00000564899 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
SF3B3-205ENST00000564899 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 MMP19Q99542 508 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 PORCNQ9H237 461 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 TMEM60Q9H2L4 133 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 DDX25Q9UHL0 483 aaKnown RBP12.56□□□□□ -0.4
SF3B3-205ENST00000564899 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-205ENST00000564899 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
SF3B3-205ENST00000564899 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CYP3A7-CYP3A51PA0A087WV96 503 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 LAD1O00515 517 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 SLC37A4O43826 429 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CUTAO60888 179 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 COL6A1P12109 1028 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
SF3B3-205ENST00000564899 EIF2AK2P19525 551 aaKnown RBP12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CYP2B6P20813 491 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 PTPREP23469 700 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CYP3A7P24462 503 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CIITAP33076 1130 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 ZNF76P36508 570 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 KCTD2Q14681 263 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CALCRLQ16602 461 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 CCL14Q16627 93 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 MAP3K21Q5TCX8 1036 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 ARHGEF16Q5VV41 709 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 FERMT2Q96AC1 680 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 PURBQ96QR8 312 aaKnown RBP12.55□□□□□ -0.4
SF3B3-205ENST00000564899 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-205ENST00000564899 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
SF3B3-205ENST00000564899 FRMPD3Q5JV73 1810 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 MBD3O95983 291 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 FCER1AP12319 257 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 CCND3P30281 292 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 PRR16Q569H4 304 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 AXDND1Q5T1B0 1012 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 MBOAT7Q96N66 472 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 PDCD2LQ9BRP1 358 aa12.54□□□□□ -0.4
SF3B3-205ENST00000564899 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 DDX49Q9Y6V7 483 aaKnown RBP12.54□□□□□ -0.4
SF3B3-205ENST00000564899 VWA3AA6NCI4 1184 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 FAM86B1E9PN63 330 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 TRAK2O60296 914 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 MARCH6O60337 910 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 FAM86B2P0C5J1 330 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 CCND2P30279 289 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 MAPK4P31152 587 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 PRPHP41219 470 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-205ENST00000564899 PGM5Q15124 567 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-205ENST00000564899 Q4G0T1 1027 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 CEP55Q53EZ4 464 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 DNERQ8NFT8 737 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 GPT2Q8TD30 523 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 MRPS27Q92552 414 aaKnown RBP12.53□□□□□ -0.4
SF3B3-205ENST00000564899 IVNS1ABPQ9Y6Y0 642 aa12.53□□□□□ -0.4
SF3B3-205ENST00000564899 PGK2P07205 417 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 NR3C2P08235 984 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 MYCLP12524 364 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 ALDH5A1P51649 535 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 GRIN1Q05586 938 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms