RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 HPS3Q969F9 1004 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 ZBTB10Q96DT7 871 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 ATP6V0A4Q9HBG4 840 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 EXOC1Q9NV70 894 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 A6NNZ2 444 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 ATP6V1G2O95670 118 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 KIF11P52732 1056 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 GFPT1Q06210 699 aaPredicted RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 TUBB8Q3ZCM7 444 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 NUP58Q9BVL2 599 aa17.94■□□□□ 0.46
LINC00554-201ENST00000564841 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
LINC00554-201ENST00000564841 A0A1W2PQC6 194 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 AKR1B10O60218 316 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 BUB1BO60566 1050 aaPredicted RBP17.93■□□□□ 0.46
LINC00554-201ENST00000564841 ZBED6P86452 979 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 PKN1Q16512 942 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 TTC38Q5R3I4 469 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 KLHDC7AQ5VTJ3 777 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 RASGRP4Q8TDF6 673 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 LMBR1Q8WVP7 490 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 GGT7Q9UJ14 662 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 TRAPPC3O43617 180 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 USO1O60763 962 aaKnown RBP17.93■□□□□ 0.46
LINC00554-201ENST00000564841 AP1G2O75843 785 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 FLT3P36888 993 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 GRIK3Q13003 919 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 C11orf91Q3C1V1 193 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 CSGALNACT2Q8N6G5 542 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 TMBIM4Q9HC24 238 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 MAGEC2Q9UBF1 373 aaPredicted RBP17.93■□□□□ 0.46
LINC00554-201ENST00000564841 TCP1P17987 556 aaKnown RBP17.93■□□□□ 0.46
LINC00554-201ENST00000564841 DNM2P50570 870 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 PAK2Q13177 524 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 SNX1Q13596 522 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 MAEAQ7L5Y9 396 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF384Q8TF68 577 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 ACTR5Q9H9F9 607 aaPredicted RBP17.93■□□□□ 0.46
LINC00554-201ENST00000564841 SLC12A6Q9UHW9 1150 aa17.93■□□□□ 0.46
LINC00554-201ENST00000564841 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 RAD51CO43502 376 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 KRT2P35908 639 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 MECOMQ03112 1051 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 UAP1Q16222 522 aaPredicted RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 CDC37Q16543 378 aaPredicted RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF662Q6ZS27 426 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 TBC1D1Q86TI0 1168 aaPredicted RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 CCDC170Q8IYT3 715 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 KRT23Q9C075 422 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 NOVA2Q9UNW9 492 aaKnown RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 MGRN1O60291 552 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 SERPINB2P05120 415 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 CYP2D6P10635 497 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 TM4SF1P30408 202 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 HSD17B3P37058 310 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 MTIF2P46199 727 aaKnown RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 MAP2K1Q02750 393 aaPredicted RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF572Q7Z3I7 529 aaPredicted RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 CACNA2D3Q8IZS8 1091 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 DUSP9Q99956 384 aaKnown RBP17.92■□□□□ 0.46
LINC00554-201ENST00000564841 GOLPH3Q9H4A6 298 aa17.92■□□□□ 0.46
LINC00554-201ENST00000564841 COL1A1P02452 1464 aaPredicted RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 SLC1A4P43007 532 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 MAGEA1P43355 309 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 DIXDC1Q155Q3 683 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 CPLX4Q7Z7G2 160 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 ENAHQ8N8S7 591 aaPredicted RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 NEUROG2Q9H2A3 272 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 HMGB1P1B2RPK0 211 aaPredicted RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 GYS1P13807 737 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 PPP4R3AQ6IN85 833 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 DNAAF5Q86Y56 855 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 CCDC155Q8N6L0 562 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 FERMT2Q96AC1 680 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 CALR3Q96L12 384 aaKnown RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
LINC00554-201ENST00000564841 MYH7P12883 1935 aa17.91■□□□□ 0.46
LINC00554-201ENST00000564841 USP17L12C9JPN9 530 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 USP17L21D6R901 530 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ANP32DO95626 131 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 XRCC4Q13426 336 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 GLE1Q53GS7 698 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 DZIP1Q86YF9 867 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 CCT6BQ92526 530 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 CNOT6LQ96LI5 555 aaKnown RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 SLC39A2Q9NP94 309 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 GCOM1H8Y6P7 765 aaPredicted RBP17.9■□□□□ 0.46
LINC00554-201ENST00000564841 MYZAPP0CAP1 466 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 STAT6P42226 847 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ITIH3Q06033 890 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ZNF844Q08AG5 666 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 ANKRD40Q6AI12 368 aa17.9■□□□□ 0.46
LINC00554-201ENST00000564841 TTI2Q6NXR4 508 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms