RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 KCNMA1Q12791 1236 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 EXOC4Q96A65 974 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 EIF4A3P38919 411 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 KIF11P52732 1056 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 SPA17Q15506 151 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 APOBEC3HQ6NTF7 200 aaKnown RBP16.92■□□□□ 0.3
HERC2-207ENST00000564734 EDEM3Q9BZQ6 932 aa16.92■□□□□ 0.3
HERC2-207ENST00000564734 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 ZNF185O15231 689 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
HERC2-207ENST00000564734 HHIPL2Q6UWX4 724 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 LRRC53A6NM62 1247 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 EIF3JO75822 258 aaKnown RBP16.91■□□□□ 0.3
HERC2-207ENST00000564734 PDXDC1Q6P996 788 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 KCTD1Q719H9 257 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 ZNF572Q7Z3I7 529 aaPredicted RBP16.91■□□□□ 0.3
HERC2-207ENST00000564734 MYOCDQ8IZQ8 938 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 TXLNBQ8N3L3 684 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 CAPZA3Q96KX2 299 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 EHD4Q9H223 541 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
HERC2-207ENST00000564734 GPS2Q13227 327 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 TSG101Q99816 390 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 IFIH1Q9BYX4 1025 aaKnown RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 CAPN6Q9Y6Q1 641 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 PJA2O43164 708 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 MMP10P09238 476 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 PRLRP16471 622 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 CREG2Q8IUH2 290 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 TRIM58Q8NG06 486 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 MBOAT7Q96N66 472 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 FGFBP2Q9BYJ0 223 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 DNAJC18Q9H819 358 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 PANK4Q9NVE7 773 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 JRKLQ9Y4A0 524 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 SLC26A4O43511 780 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
HERC2-207ENST00000564734 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 SCNN1DP51172 638 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 RRAGAQ7L523 313 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 MLXIPQ9HAP2 919 aa16.9■□□□□ 0.3
HERC2-207ENST00000564734 CYP3A7-CYP3A51PA0A087WV96 503 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 CYP3A7P24462 503 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 MCM3P25205 808 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
HERC2-207ENST00000564734 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 HGSNATQ68CP4 663 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 COL4A3BPQ9Y5P4 624 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 MYH7BA7E2Y1 1941 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
HERC2-207ENST00000564734 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
HERC2-207ENST00000564734 NFIAQ12857 509 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 ZFPM1Q8IX07 1006 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 ZC3H3Q8IXZ2 948 aaKnown RBP16.89■□□□□ 0.29
HERC2-207ENST00000564734 MKL1Q969V6 931 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 ZC3H12CQ9C0D7 883 aaKnown RBP16.89■□□□□ 0.29
HERC2-207ENST00000564734 NT5C3AQ9H0P0 336 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
HERC2-207ENST00000564734 NOL4O94818 638 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 SSU72P8A0A1W2PR75 194 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 E9PMD0 336 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 RBAK-RBAKDNI3L0D1 243 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 TACC1O75410 805 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 MOCS3O95396 460 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■□□□ 13
HERC2-207ENST00000564734 USP11P51784 963 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 ITIH3Q06033 890 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 DOK7Q18PE1 504 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 CRYGNQ8WXF5 182 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 CEP63Q96MT8 703 aa16.88■□□□□ 0.29
HERC2-207ENST00000564734 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
HERC2-207ENST00000564734 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 QRICH1Q2TAL8 776 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 MMGT1Q8N4V1 131 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 SALL4Q9UJQ4 1053 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 FRMD3A2A2Y4 597 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms