RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 DDX47Q9H0S4 455 aaKnown RBP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 PRKAB2O43741 272 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 UBOX5O94941 541 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 MBD4O95243 580 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 GNAT1P11488 350 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ATP4AP20648 1035 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 P2RX5Q93086 422 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ITFG2Q969R8 447 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 INPP4AQ96PE3 977 aaPredicted RBP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 TRIM31Q9BZY9 425 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ZCWPW1Q9H0M4 648 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ZFATQ9P243 1243 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 PLEKHA8P1O95397 391 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 GSTA1P08263 222 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 CCND1P24385 295 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 KLRC1P26715 233 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ARID5AQ03989 594 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 TAF4BQ92750 862 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
SCAMP2-204ENST00000563829 CEP104O60308 925 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 CUL1Q13616 776 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 FAM114A1Q8IWE2 563 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 RNF10Q8N5U6 811 aaKnown RBP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 ATP8A1Q9Y2Q0 1164 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 PJA2O43164 708 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 LCA5LO95447 670 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 ITGA6P23229 1130 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 HNRNPH3P31942 346 aaKnown RBP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 PRPHP41219 470 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 PDE4DQ08499 809 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 FIGNQ5HY92 759 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 KLHL29Q96CT2 875 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
SCAMP2-204ENST00000563829 DPPA5A6NC42 116 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 KLRC4O43908 158 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 FESP07332 822 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 KRT16P08779 473 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 FCER1AP12319 257 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 STK4Q13043 487 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 MTMR3Q13615 1198 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 METTL24Q5JXM2 366 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 GOPCQ9HD26 462 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 AHCYL1O43865 530 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 SHBGP04278 402 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 CCNE1P24864 410 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 KIF5BP33176 963 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 BORCS6Q96GS4 357 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 DIP2AQ14689 1571 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 PDHA1P08559 390 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 NLRP5P59047 1200 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 NCALDP61601 193 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 MXRA7P84157 204 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
SCAMP2-204ENST00000563829 LTN1O94822 1766 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 BICDL2A1A5D9 508 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 A6NHS1 94 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 RHOBTB3O94955 611 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 UBA7P41226 1012 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 MEI1Q5TIA1 1274 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 NAF1Q96HR8 494 aaKnown RBP13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms