RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GPKOWQ92917 476 aaPredicted RBP eCLIP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 ZFP91Q96JP5 570 aaPredicted RBP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 NECAB3Q96P71 396 aaPredicted RBP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 TAF6LQ9Y6J9 622 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 BDP1A6H8Y1 2624 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 LPXNO60711 386 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 SP2Q02086 613 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 PGM5Q15124 567 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 MYSM1Q5VVJ2 828 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 C7orf31Q8N865 590 aa19.53■□□□□ 0.72
HDGFL3-203ENST00000563404 KIF28PB7ZC32 967 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 CYTH3O43739 400 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 TLL1O43897 1013 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 KCNJ6P48051 423 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 KCNQ1P51787 676 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 PTH1RQ03431 593 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 PTK7Q13308 1070 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 GRB10Q13322 594 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 MBTPS1Q14703 1052 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 GRM4Q14833 912 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 CELF3Q5SZQ8 465 aaKnown RBP19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 CNKSR3Q6P9H4 555 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 HOMER1Q86YM7 354 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 PIGSQ96S52 555 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 KATNAL1Q9BW62 490 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 TSPYL2Q9H2G4 693 aaPredicted RBP19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 BCAS3Q9H6U6 928 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 RIOX1Q9H6W3 641 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 MYH7BA7E2Y1 1941 aa19.52■□□□□ 0.72
HDGFL3-203ENST00000563404 GTPBP6O43824 516 aaPredicted RBP19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 GGPS1O95749 300 aa19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 CYP21A2P08686 494 aa19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 SKIV2LQ15477 1246 aaKnown RBP19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 ZNF618Q5T7W0 954 aa19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 MAP3K20Q9NYL2 800 aaKnown RBP19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 TCF20Q9UGU0 1960 aaKnown RBP19.51■□□□□ 0.71
HDGFL3-203ENST00000563404 NCOR1O75376 2440 aa19.5■□□□□ 0.71
HDGFL3-203ENST00000563404 PPFIA4O75335 1185 aa19.5■□□□□ 0.71
HDGFL3-203ENST00000563404 SPATA33Q96N06 139 aa19.5■□□□□ 0.71
HDGFL3-203ENST00000563404 C16orf70Q9BSU1 422 aa19.5■□□□□ 0.71
HDGFL3-203ENST00000563404 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 PARNO95453 639 aaKnown RBP19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 TROAPQ12815 778 aa19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 FCHSD1Q86WN1 690 aa19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 SAMD3Q8N6K7 520 aa19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 IL27Q8NEV9 243 aa19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 RAPGEFL1Q9UHV5 662 aa19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 BAZ2BQ9UIF8 2168 aaKnown RBP19.49■□□□□ 0.71
HDGFL3-203ENST00000563404 ABHD14A-ACY1A0A1B0GW23 586 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 IFIT3O14879 490 aaKnown RBP19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 GJB5O95377 273 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 COL9A1P20849 921 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 CHMLP26374 656 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 CCND2P30279 289 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 KCNV1Q6PIU1 500 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 GDPD5Q8WTR4 605 aa19.48■□□□□ 0.71
HDGFL3-203ENST00000563404 PNMA6FA0A0J9YX94 578 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 E7EWF7 191 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 TGFB3P10600 412 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 ANTXR2P58335 489 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 MRPS9P82933 396 aaKnown RBP19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 TRDNQ13061 729 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 RAD9AQ99638 391 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 ZBED2Q9BTP6 218 aa19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 U3KPZ7 1027 aaPredicted RBP19.47■□□□□ 0.71
HDGFL3-203ENST00000563404 LGR5O75473 907 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 HOXC8P31273 242 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 WTAPQ15007 396 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 AAK1Q2M2I8 961 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 SERINC5Q86VE9 423 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 OSBPL7Q9BZF2 842 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 TELO2Q9Y4R8 837 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 FRMPD4Q14CM0 1322 aa19.46■□□□□ 0.71
HDGFL3-203ENST00000563404 LINC01553A4QN01 128 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 LGALS2P05162 132 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 THPOP40225 353 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 IKBKEQ14164 716 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 FAM117BQ6P1L5 589 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 IGDCC4Q8TDY8 1250 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 PIBF1Q8WXW3 757 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 SUGCTQ9HAC7 445 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 MLXIPQ9HAP2 919 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 MTUS1Q9ULD2 1270 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 COG5Q9UP83 839 aa19.45■□□□□ 0.7
HDGFL3-203ENST00000563404 H3BRB1 525 aa19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 SMIM10L2AP0DMW4 78 aa19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 SMIM10L2BP0DMW5 78 aa19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 ERVK-21P61565 698 aa19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 MB21D2Q8IYB1 491 aaPredicted RBP19.44■□□□□ 0.7
HDGFL3-203ENST00000563404 DBF4BQ8NFT6 615 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms