RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 LRRC2Q9BYS8 371 aa19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 PRDM12Q9H4Q4 367 aa19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 MLXIPQ9HAP2 919 aa19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 HDAC6Q9UBN7 1215 aa19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 GTF2IRD1Q9UHL9 959 aa19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 YBX2Q9Y2T7 364 aaKnown RBP19.38■□□□□ 0.69
TNRC6A-209ENST00000562829 TRIP12Q14669 1992 aaPredicted RBP19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 F2P00734 622 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 CALM1P0DP23 149 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 CALM2P0DP24 149 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 CALM3P0DP25 149 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 ATP2A2P16615 1042 aaKnown RBP19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 HSDL1Q3SXM5 330 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 RNF20Q5VTR2 975 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 MYSM1Q5VVJ2 828 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 CAGE1Q8TC20 777 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 GPKOWQ92917 476 aaPredicted RBP eCLIP19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 SLC12A7Q9Y666 1083 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 CDH23Q9H251 3354 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 MYO9BQ13459 2157 aa19.37■□□□□ 0.69
TNRC6A-209ENST00000562829 TGFB3P10600 412 aa19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 LIFRP42702 1097 aa19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 SP2Q02086 613 aa19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 COL9A3Q14050 684 aaPredicted RBP19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 AFAP1L1Q8TED9 768 aa19.36■□□□□ 0.69
TNRC6A-209ENST00000562829 NOP56O00567 594 aaKnown RBP19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 STAM2O75886 525 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 SMARCA1P28370 1054 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 PPP2R2DQ66LE6 453 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 USP17L6PQ6QN14 398 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 LRRC8DQ7L1W4 858 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 CTAGE1Q96RT6 745 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 PCDHA11Q9Y5I1 949 aa19.35■□□□□ 0.69
TNRC6A-209ENST00000562829 FRMPD4Q14CM0 1322 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 HAS3O00219 553 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 MYOGP15173 224 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 SELPP16109 830 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 MRPS9P82933 396 aaKnown RBP19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 SYNE3Q6ZMZ3 975 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 PPM1EQ8WY54 764 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 DHX38Q92620 1227 aaKnown RBP19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 SLC9A7Q96T83 725 aa19.34■□□□□ 0.69
TNRC6A-209ENST00000562829 TET1Q8NFU7 2136 aa19.33■□□□□ 0.69
TNRC6A-209ENST00000562829 FIBPO43427 364 aa19.33■□□□□ 0.68
TNRC6A-209ENST00000562829 IGFBP4P22692 258 aa19.33■□□□□ 0.68
TNRC6A-209ENST00000562829 NEDD9Q14511 834 aa19.33■□□□□ 0.68
TNRC6A-209ENST00000562829 INPP4AQ96PE3 977 aaPredicted RBP19.33■□□□□ 0.68
TNRC6A-209ENST00000562829 NEK1Q96PY6 1258 aa19.33■□□□□ 0.68
TNRC6A-209ENST00000562829 hCG_1642624A0A1W2PR95 340 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 CDC45O75419 566 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 CKBP12277 381 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 KCNJ6P48051 423 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 ZNF200P98182 395 aaPredicted RBP19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 PTK7Q13308 1070 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 CYFIP1Q7L576 1253 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 USP38Q8NB14 1042 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 FANCBQ8NB91 859 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 COL25A1Q9BXS0 654 aaPredicted RBP19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 PSTPIP2Q9H939 334 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 DOCK5Q9H7D0 1870 aa19.32■□□□□ 0.68
TNRC6A-209ENST00000562829 PIK3CDO00329 1044 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 MEIS2O14770 477 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 BAIAP3O94812 1187 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 PARNO95453 639 aaKnown RBP19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 LGALS2P05162 132 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 ICAM3P32942 547 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 SP4Q02446 784 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 PCNX4Q63HM2 1172 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 METTL7BQ6UX53 244 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 TMTC3Q6ZXV5 915 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 HEATR3Q7Z4Q2 680 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 NLRX1Q86UT6 975 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 TCEANC2Q96MN5 208 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 C16orf70Q9BSU1 422 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 BCAS3Q9H6U6 928 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 EYSQ5T1H1 3165 aa19.31■□□□□ 0.68
TNRC6A-209ENST00000562829 UNC80Q8N2C7 3258 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 C17orf102A2RUQ5 167 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 SPATA31C2B4DYI2 1134 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 KIF28PB7ZC32 967 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 H3BRB1 525 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 CA3P07451 260 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 RBL2Q08999 1139 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 SEMA3FQ13275 785 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 ADGRE1Q14246 886 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 PHOSPHO2Q8TCD6 241 aa19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 TUT1Q9H6E5 874 aaKnown RBP19.3■□□□□ 0.68
TNRC6A-209ENST00000562829 SPDYE3A6NKU9 549 aa19.29■□□□□ 0.68
TNRC6A-209ENST00000562829 UBE2SQ16763 222 aa19.29■□□□□ 0.68
TNRC6A-209ENST00000562829 ZNF618Q5T7W0 954 aa19.29■□□□□ 0.68
TNRC6A-209ENST00000562829 UTP14CQ5TAP6 766 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms