RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 ALDH5A1P51649 535 aaPredicted RBP15.7■□□□□ 0.1
CLK3-209ENST00000562670 APLP1P51693 650 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 PPP2R5CQ13362 524 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 HYIQ5T013 277 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 B3GNT9Q6UX72 402 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 KRBA2Q6ZNG9 492 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 ANKRD13CQ8N6S4 541 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 IQUBQ8NA54 791 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 MMP19Q99542 508 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
CLK3-209ENST00000562670 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 CCDC39Q9UFE4 941 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 HOOK1Q9UJC3 728 aaKnown RBP15.7■□□□□ 0.1
CLK3-209ENST00000562670 PLXNB2O15031 1838 aa15.7■□□□□ 0.1
CLK3-209ENST00000562670 ASTN1O14525 1302 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 A0A087X0B3 334 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
CLK3-209ENST00000562670 MARCH6O60337 910 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 PEX10O60683 326 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 ALDH1A1P00352 501 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 UBXN2AP68543 259 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 MTMR1Q13613 665 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 TAF1CQ15572 869 aaPredicted RBP15.69■□□□□ 0.1
CLK3-209ENST00000562670 TPRNQ4KMQ1 711 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 HAUS3Q68CZ6 603 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 NLRX1Q86UT6 975 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 CABP7Q86V35 215 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 CNNM3Q8NE01 707 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 MORC4Q8TE76 937 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 MMTAG2Q9BU76 263 aaKnown RBP15.69■□□□□ 0.1
CLK3-209ENST00000562670 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
CLK3-209ENST00000562670 PORCNQ9H237 461 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 KCNH7Q9NS40 1196 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 STK17AQ9UEE5 414 aa15.69■□□□□ 0.1
CLK3-209ENST00000562670 SYCE3A1L190 88 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 POTEMA6NI47 508 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
CLK3-209ENST00000562670 TLR2O60603 784 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 MYL1P05976 194 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 MUTP22033 750 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 ICAM3P32942 547 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 GRB14Q14449 540 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 GNPTABQ3T906 1256 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 LONRF3Q496Y0 759 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 LRCH2Q5VUJ6 765 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 ZNF467Q7Z7K2 595 aaPredicted RBP15.68■□□□□ 0.1
CLK3-209ENST00000562670 ERMNQ8TAM6 284 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 FGD4Q96M96 766 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 SDF4Q9BRK5 362 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 ZNF577Q9BSK1 485 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 EFCC1Q9HA90 598 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 ZFYVE28Q9HCC9 887 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
CLK3-209ENST00000562670 TBC1D22BQ9NU19 505 aa15.68■□□□□ 0.1
CLK3-209ENST00000562670 SOWAHBA6NEL2 793 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 PP2D1A8MPX8 630 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
CLK3-209ENST00000562670 ARP10275 920 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 CNTN2Q02246 1040 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 STXBP2Q15833 593 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 TMEM119Q4V9L6 283 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 PDXDC2PQ6P474 469 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 C17orf99Q6UX52 265 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 OTOP1Q7RTM1 612 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 CEP57L1Q8IYX8 460 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 NEK9Q8TD19 979 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 CALML4Q96GE6 196 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 PURBQ96QR8 312 aaKnown RBP15.67■□□□□ 0.1
CLK3-209ENST00000562670 FUCA2Q9BTY2 467 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 TEKT3Q9BXF9 490 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 DIS3Q9Y2L1 958 aaKnown RBP15.67■□□□□ 0.1
CLK3-209ENST00000562670 NFASCO94856 1347 aa15.67■□□□□ 0.1
CLK3-209ENST00000562670 CA12O43570 354 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 GAS7O60861 476 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 MYCLP12524 364 aaPredicted RBP15.66■□□□□ 0.1
CLK3-209ENST00000562670 STAT6P42226 847 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 MDM2Q00987 491 aaPredicted RBP15.66■□□□□ 0.1
CLK3-209ENST00000562670 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
CLK3-209ENST00000562670 CAMK4Q16566 473 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 DEFB115Q30KQ5 88 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 NAALADL2Q58DX5 795 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 RRAGBQ5VZM2 374 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 PDILTQ8N807 584 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 RDM1Q8NG50 284 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 DHX58Q96C10 678 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
CLK3-209ENST00000562670 CFHR5Q9BXR6 569 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 KIAA1468Q9P260 1216 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 SERTAD1Q9UHV2 236 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
CLK3-209ENST00000562670 SLC15A5A6NIM6 579 aa15.65■□□□□ 0.1
CLK3-209ENST00000562670 ASB14A6NK59 587 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms