RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 Q8N1Y9 231 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 NPLOC4Q8TAT6 608 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 IGDCC4Q8TDY8 1250 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 MBD6Q96DN6 1003 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 WRNIP1Q96S55 665 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 NKX2-4Q9H2Z4 354 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 CYP26B1Q9NR63 512 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 CROTQ9UKG9 612 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 ZNF652Q9Y2D9 606 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 COA3Q9Y2R0 106 aaPredicted RBP5.34□□□□□ -1.55
DENND4A-205ENST00000562540 TCAF1Q9Y4C2 921 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 X6R8D5 127 aa5.34□□□□□ -1.55
DENND4A-205ENST00000562540 MYO1BO43795 1136 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 BCL6P41182 706 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 SELENOPP49908 381 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 GTF2A2P52657 109 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 ZNF143P52747 638 aaPredicted RBP5.33□□□□□ -1.56
DENND4A-205ENST00000562540 EPHB4P54760 987 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 PPP2CBP62714 309 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 PPP2CAP67775 309 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 E4F1Q66K89 784 aaPredicted RBP5.33□□□□□ -1.56
DENND4A-205ENST00000562540 PKN3Q6P5Z2 889 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 NLRP10Q86W26 655 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 KBTBD2Q8IY47 623 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 DNERQ8NFT8 737 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 CPLX3Q8WVH0 158 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 DIO2Q92813 273 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
DENND4A-205ENST00000562540 TMEM169Q96HH4 297 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 SHDQ96IW2 340 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 DTLQ9NZJ0 730 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 PCDHB4Q9Y5E5 795 aa5.33□□□□□ -1.56
DENND4A-205ENST00000562540 MUSKO15146 869 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 MEFVO15553 781 aaPredicted RBP5.32□□□□□ -1.56
DENND4A-205ENST00000562540 AMHP03971 560 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
DENND4A-205ENST00000562540 CASP7P55210 303 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 KCNAB2Q13303 367 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 RASGRP4Q8TDF6 673 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 ZCCHC14Q8WYQ9 949 aaKnown RBP5.32□□□□□ -1.56
DENND4A-205ENST00000562540 TMEM209Q96SK2 561 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 LGR4Q9BXB1 951 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 FTSJ1Q9UET6 329 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 HS3ST3A1Q9Y663 406 aa5.32□□□□□ -1.56
DENND4A-205ENST00000562540 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
DENND4A-205ENST00000562540 NASPP49321 788 aaPredicted RBP5.31□□□□□ -1.56
DENND4A-205ENST00000562540 MFAP1P55081 439 aaKnown RBP5.31□□□□□ -1.56
DENND4A-205ENST00000562540 CYP4F3Q08477 520 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 NCAPHQ15003 741 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 SLFN13Q68D06 897 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 TRMT10BQ6PF06 316 aaKnown RBP5.31□□□□□ -1.56
DENND4A-205ENST00000562540 TEPPQ6URK8 271 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 CCDC103Q8IW40 242 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 KLHL36Q8N4N3 616 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 ARRDC4Q8NCT1 418 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 BTN2A2Q8WVV5 523 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 MRGPRX3Q96LB0 322 aa5.31□□□□□ -1.56
DENND4A-205ENST00000562540 TCRBV5S2A0A599 114 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 SCAMP3O14828 347 aaKnown RBP5.3□□□□□ -1.56
DENND4A-205ENST00000562540 B4GALT4O60513 344 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
DENND4A-205ENST00000562540 ECI1P42126 302 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 TMC5Q6UXY8 1006 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 CHAMP1Q96JM3 812 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 PTPN18Q99952 460 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 BARX1Q9HBU1 254 aaPredicted RBP5.3□□□□□ -1.56
DENND4A-205ENST00000562540 TMEFF2Q9UIK5 374 aaPredicted RBP5.3□□□□□ -1.56
DENND4A-205ENST00000562540 FBXL7Q9UJT9 491 aa5.3□□□□□ -1.56
DENND4A-205ENST00000562540 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
DENND4A-205ENST00000562540 H7BY64 318 aa5.29□□□□□ -1.56
DENND4A-205ENST00000562540 NFATC3Q12968 1075 aa5.29□□□□□ -1.56
DENND4A-205ENST00000562540 R3HDM1Q15032 1099 aaKnown RBP5.29□□□□□ -1.56
DENND4A-205ENST00000562540 FAM169BQ8N8A8 192 aa5.29□□□□□ -1.56
DENND4A-205ENST00000562540 ZDHHC9Q9Y397 364 aa5.29□□□□□ -1.56
DENND4A-205ENST00000562540 CCDC9Q9Y3X0 531 aaKnown RBP5.29□□□□□ -1.56
DENND4A-205ENST00000562540 TBX1O43435 398 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 ZNF623O75123 536 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 RECKO95980 971 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 LRG1P02750 347 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 HOXC12P31275 282 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 EMC4Q5J8M3 183 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 PPIL6Q8IXY8 311 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 RCBTB1Q8NDN9 531 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 WWC2-AS2Q96NR7 200 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 MEGF9Q9H1U4 602 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 WDR26Q9H7D7 661 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 CLDND1Q9NY35 253 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 MYOTQ9UBF9 498 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 PCDHA2Q9Y5H9 948 aa5.28□□□□□ -1.56
DENND4A-205ENST00000562540 ARNTLO00327 626 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 TADA3O75528 432 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 DGKIO75912 1065 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 LTBRP36941 435 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 KCNJ6P48051 423 aa5.27□□□□□ -1.57
DENND4A-205ENST00000562540 GJA8P48165 433 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms