RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 DPF3Q92784 378 aa12.82□□□□□ -0.36
TSC2-218ENST00000562474 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
TSC2-218ENST00000562474 DDX39AO00148 427 aaKnown RBP12.81□□□□□ -0.36
TSC2-218ENST00000562474 ATP9AO75110 1047 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 GH1P01241 217 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 ZNF286BP0CG31 522 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 ARP10275 920 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 GNA11P29992 359 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 SREBF1P36956 1147 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 NR5A1Q13285 461 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 TRIM60Q495X7 471 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 GJA10Q969M2 543 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
TSC2-218ENST00000562474 PHF20Q9BVI0 1012 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 MAF1Q9H063 256 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 SPC25Q9HBM1 224 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
TSC2-218ENST00000562474 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
TSC2-218ENST00000562474 PCDHA4Q9UN74 947 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 UBIAD1Q9Y5Z9 338 aa12.81□□□□□ -0.36
TSC2-218ENST00000562474 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 FAM86B1E9PN63 330 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 EDIL3O43854 480 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 MMP3P08254 477 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 FAM86B2P0C5J1 330 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 SYN1P17600 705 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 ZNF76P36508 570 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 RTP1P59025 263 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 INF2Q27J81 1249 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 KRT40Q6A162 431 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 CYFIP1Q7L576 1253 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
TSC2-218ENST00000562474 EHMT1Q9H9B1 1298 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 STARD7Q9NQZ5 370 aa12.8□□□□□ -0.36
TSC2-218ENST00000562474 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 M0R2N6 131 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 FIBPO43427 364 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 TDP2O95551 362 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 FOSP01100 380 aaPredicted RBP12.79□□□□□ -0.36
TSC2-218ENST00000562474 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
TSC2-218ENST00000562474 MTMR1Q13613 665 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 HSDL1Q3SXM5 330 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 SLC39A5Q6ZMH5 540 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 NLRX1Q86UT6 975 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 TBCKQ8TEA7 893 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 MXRA8Q9BRK3 442 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
TSC2-218ENST00000562474 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 WNT7AO00755 349 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
TSC2-218ENST00000562474 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 KCNA2P16389 499 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 PRR16Q569H4 304 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 CELF3Q5SZQ8 465 aaKnown RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 UTP14CQ5TAP6 766 aaKnown RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 TRIM50Q86XT4 487 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 PCSK9Q8NBP7 692 aaKnown RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 DAGLBQ8NCG7 672 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 BICD2Q8TD16 824 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 CRYGNQ8WXF5 182 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 WASF1Q92558 559 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 GLT8D2Q9H1C3 349 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 MLXIPQ9HAP2 919 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
TSC2-218ENST00000562474 KCNH7Q9NS40 1196 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 GRIN2DO15399 1336 aa12.78□□□□□ -0.36
TSC2-218ENST00000562474 IGLV3-22A0A075B6J6 115 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 CCDC194A0A1B0GVG4 234 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 EVI5O60447 810 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 XBP1P17861 261 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 ATP2B1P20020 1258 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 GJB2P29033 226 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 ICAM3P32942 547 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 KRT2P35908 639 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 CPT1AP50416 773 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
TSC2-218ENST00000562474 TLE2Q04725 743 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 ITGB3BPQ13352 177 aaPredicted RBP12.77□□□□□ -0.37
TSC2-218ENST00000562474 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.37
TSC2-218ENST00000562474 CEP55Q53EZ4 464 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 FAM47CQ5HY64 1035 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
TSC2-218ENST00000562474 GPRASP2Q96D09 838 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms