RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ADGRE1Q14246 886 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 KIAA0753Q2KHM9 967 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 PHOSPHO2Q8TCD6 241 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 DHX38Q92620 1227 aaKnown RBP18.75■□□□□ 0.59
SNX1-213ENST00000561026 ZFP91Q96JP5 570 aaPredicted RBP18.75■□□□□ 0.59
SNX1-213ENST00000561026 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 ALG1Q9BT22 464 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 SCN5AQ14524 2016 aa18.75■□□□□ 0.59
SNX1-213ENST00000561026 SORBS3O60504 671 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 SELPP16109 830 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
SNX1-213ENST00000561026 RBL2Q08999 1139 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 GPNMBQ14956 572 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 PPP2R2DQ66LE6 453 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 GPKOWQ92917 476 aaPredicted RBP eCLIP18.74■□□□□ 0.59
SNX1-213ENST00000561026 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
SNX1-213ENST00000561026 TMEM87BQ96K49 555 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 FRMPD4Q14CM0 1322 aa18.74■□□□□ 0.59
SNX1-213ENST00000561026 SPTBN5Q9NRC6 3674 aaKnown RBP18.73■□□□□ 0.59
SNX1-213ENST00000561026 SLC27A2O14975 620 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 STAM2O75886 525 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 MRPS9P82933 396 aaKnown RBP18.73■□□□□ 0.59
SNX1-213ENST00000561026 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
SNX1-213ENST00000561026 NECTIN1Q15223 517 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 GNPTABQ3T906 1256 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 LRRC8DQ7L1W4 858 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 MLXIPQ9HAP2 919 aa18.73■□□□□ 0.59
SNX1-213ENST00000561026 SH2B2O14492 632 aaPredicted RBP18.72■□□□□ 0.59
SNX1-213ENST00000561026 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 PARNO95453 639 aaKnown RBP18.72■□□□□ 0.59
SNX1-213ENST00000561026 CKBP12277 381 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 IGFBP4P22692 258 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 GNAQP50148 359 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 PTK7Q13308 1070 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 CREB3L3Q68CJ9 461 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 PPM1EQ8WY54 764 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 INPP4AQ96PE3 977 aaPredicted RBP18.72■□□□□ 0.59
SNX1-213ENST00000561026 C16orf70Q9BSU1 422 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 SEC63Q9UGP8 760 aaKnown RBP18.72■□□□□ 0.59
SNX1-213ENST00000561026 GBF1Q92538 1859 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 TRIP12Q14669 1992 aaPredicted RBP18.72■□□□□ 0.59
SNX1-213ENST00000561026 TET1Q8NFU7 2136 aa18.72■□□□□ 0.59
SNX1-213ENST00000561026 MYH7BA7E2Y1 1941 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 SPATA31C2B4DYI2 1134 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 CA3P07451 260 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 ICAM3P32942 547 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 LIFRP42702 1097 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 ZNF200P98182 395 aaPredicted RBP18.71■□□□□ 0.59
SNX1-213ENST00000561026 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 HERC6Q8IVU3 1022 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 SRBD1Q8N5C6 995 aaKnown RBP18.71■□□□□ 0.59
SNX1-213ENST00000561026 BCAS3Q9H6U6 928 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 TTC28Q96AY4 2481 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 TANC1Q9C0D5 1861 aa18.71■□□□□ 0.59
SNX1-213ENST00000561026 MEIS2O14770 477 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 NBNO60934 754 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 PLEKHA8P1O95397 391 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 CXCL10P02778 98 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 CALM1P0DP23 149 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 CALM2P0DP24 149 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 CALM3P0DP25 149 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 HIC1Q14526 733 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 TRIM71Q2Q1W2 868 aaKnown RBP18.7■□□□□ 0.58
SNX1-213ENST00000561026 SMARCC2Q8TAQ2 1214 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 CUL5Q93034 780 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 RTEL1Q9NZ71 1219 aa18.7■□□□□ 0.58
SNX1-213ENST00000561026 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 H3BRB1 525 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 FIBPO43427 364 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 RXRAP19793 462 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 SEMA3FQ13275 785 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 NEDD9Q14511 834 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 BMP2KLQ5H9B9 411 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 PCNX4Q63HM2 1172 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 TRAF7Q6Q0C0 670 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
SNX1-213ENST00000561026 WNT8BQ93098 351 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 TUT1Q9H6E5 874 aaKnown RBP18.69■□□□□ 0.58
SNX1-213ENST00000561026 SLC12A7Q9Y666 1083 aa18.69■□□□□ 0.58
SNX1-213ENST00000561026 NOP56O00567 594 aaKnown RBP18.68■□□□□ 0.58
SNX1-213ENST00000561026 KCNJ6P48051 423 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 CCDC85BQ15834 202 aaPredicted RBP18.68■□□□□ 0.58
SNX1-213ENST00000561026 ZNF618Q5T7W0 954 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 CNKSR3Q6P9H4 555 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 SERINC5Q86VE9 423 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
SNX1-213ENST00000561026 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 MUC3AQ02505 3323 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 LGALS2P05162 132 aa18.68■□□□□ 0.58
SNX1-213ENST00000561026 WDR5P61964 334 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms