RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	PCNX4	Q63HM2	1172 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	CCSAP	Q6IQ19	270 aa	Predicted RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	GALNT17	Q6IS24	598 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	KCNV1	Q6PIU1	500 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	FCHSD1	Q86WN1	690 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	FBXO16	Q8IX29	292 aa	Predicted RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	NSUN7	Q8NE18	718 aa	Known RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	CCDC148	Q8NFR7	591 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	SMARCC2	Q8TAQ2	1214 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	BICD2	Q8TD16	824 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	SCFD2	Q8WU76	684 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	LLPH	Q9BRT6	129 aa	Known RBP	9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	EHMT1	Q9H9B1	1298 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	C6orf50	Q9HD87	102 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	PDGFC	Q9NRA1	345 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	PCDHA6	Q9UN73	950 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	PCDHA8	Q9Y5H6	950 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	WDR81	Q562E7	1941 aa		9.22	□□□□□ -0.93
RNF31-222	ENST00000560631	DOCK5	Q9H7D0	1870 aa		9.21	□□□□□ -0.93
RNF31-222	ENST00000560631	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631		M0R2N6	131 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	CTAGE5	O15320	804 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	RGS20	O76081	388 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	FDPS	P14324	419 aa	Known RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	SMPD1	P17405	629 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	ADCYAP1R1	P41586	468 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	MRPS9	P82933	396 aa	Known RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	TTLL4	Q14679	1199 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	NECAB2	Q7Z6G3	386 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	RNF180	Q86T96	592 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	NECAB1	Q8N987	351 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	DAGLB	Q8NCG7	672 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	IL31RA	Q8NI17	732 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	WASF1	Q92558	559 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	INPP4A	Q96PE3	977 aa	Predicted RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	WDR11	Q9BZH6	1224 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	SPC25	Q9HBM1	224 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	XPNPEP3	Q9NQH7	507 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	ORC3	Q9UBD5	711 aa	Predicted RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	DDX49	Q9Y6V7	483 aa	Known RBP	9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	CEP290	O15078	2479 aa		9.21	□□□□□ -0.94
RNF31-222	ENST00000560631	DNAH12	Q6ZR08	3092 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	MOXD2P	A6NHM9	499 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	SPDYE3	A6NKU9	549 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	MAFG	O15525	162 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	PGK1	P00558	417 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	CYP3A4	P08684	503 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	XBP1	P17861	261 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	SREBF1	P36956	1147 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	NPY5R	Q15761	445 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	UBE2S	Q16763	222 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	ANO1	Q5XXA6	986 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	EEPD1	Q7L9B9	569 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	PCSK9	Q8NBP7	692 aa	Known RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	CRYGN	Q8WXF5	182 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	EMID1	Q96A84	441 aa	Predicted RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	PAWR	Q96IZ0	340 aa	Known RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	SENP7	Q9BQF6	1050 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	PHF20	Q9BVI0	1012 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	VPS54	Q9P1Q0	977 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	DDX41	Q9UJV9	622 aa	Known RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	PHF24	Q9UPV7	400 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	UBIAD1	Q9Y5Z9	338 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	MYH9	P35579	1960 aa	Known RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	TRIP12	Q14669	1992 aa	Predicted RBP	9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	SYNRG	Q9UMZ2	1314 aa		9.2	□□□□□ -0.94
RNF31-222	ENST00000560631	KBTBD13	C9JR72	458 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	DYNC1LI2	O43237	492 aa	Predicted RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	ZEB2	O60315	1214 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	ARIH2	O95376	493 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	TXN	P10599	105 aa	Known RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	MYCL	P12524	364 aa	Predicted RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	CIITA	P33076	1130 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	NLRP5	P59047	1200 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	HMGN5	P82970	282 aa	Known RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	MLLT1	Q03111	559 aa	Predicted RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	SEMA3F	Q13275	785 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	GNPTAB	Q3T906	1256 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	C1orf53	Q5VUE5	145 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	NOL8	Q76FK4	1167 aa	Known RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	NIPA1	Q7RTP0	329 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	TLK2	Q86UE8	772 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	CCDC83	Q8IWF9	413 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	REXO1	Q8N1G1	1221 aa	Known RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	DIS3L	Q8TF46	1054 aa	Known RBP	9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	GPRASP2	Q96D09	838 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	TMX3	Q96JJ7	454 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	AIFM3	Q96NN9	605 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	ANO3	Q9BYT9	981 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	AP5M1	Q9H0R1	490 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	C11orf49	Q9H6J7	331 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	JADE2	Q9NQC1	790 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631	PCDHA4	Q9UN74	947 aa		9.19	□□□□□ -0.94
RNF31-222	ENST00000560631		A6NJR5	290 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	SPATA31C2	B4DYI2	1134 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	ADAMTS3	O15072	1205 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	FIBP	O43427	364 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	EDIL3	O43854	480 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	KPNA6	O60684	536 aa		9.18	□□□□□ -0.94
RNF31-222	ENST00000560631	PPFIA3	O75145	1194 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms