RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 IL31RAQ8NI17 732 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 MYLIPQ8WY64 445 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 COPS5Q92905 334 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 TIFAQ96CG3 184 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
SNRPA1-210ENST00000560383 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 PFKMP08237 780 aa17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 ACRP10323 421 aa17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 FCHSD1Q86WN1 690 aa17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 RPUSD2Q8IZ73 545 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 EMID1Q96A84 441 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-210ENST00000560383 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 STAM2O75886 525 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 GH1P01241 217 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 FGBP02675 491 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 FOSL2P15408 326 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 CCND2P30279 289 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 METAP2P50579 478 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 ARHGAP1Q07960 439 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 RAB30Q15771 203 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 LY6KQ17RY6 165 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 CUL5Q93034 780 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 PBX4Q9BYU1 374 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 ZNF576Q9H609 170 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 PSTPIP2Q9H939 334 aa17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-210ENST00000560383 SPTBN5Q9NRC6 3674 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 TGFB3P10600 412 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 MYCLP12524 364 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 CCL23P55773 120 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 MRPS9P82933 396 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 TOB2Q14106 344 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 NBPF20Q3BBV1 942 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 WWC2Q6AWC2 1192 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 INPP4AQ96PE3 977 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 CYP46A1Q9Y6A2 500 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 MRVI1Q9Y6F6 885 aa17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-210ENST00000560383 TRANK1O15050 2925 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 MMP3P08254 477 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 ICAM3P32942 547 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 RFC2P35250 354 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 ANAPC15P60006 121 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 GRIN2CQ14957 1233 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 SESTD1Q86VW0 696 aa17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.384e-9■■■□□ 16.8
SNRPA1-210ENST00000560383 CXXC1Q9P0U4 656 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-210ENST00000560383 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 CYP2C9P11712 490 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 HOXD8P13378 290 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 PDIA3P30101 505 aaKnown RBP17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 LAMC2Q13753 1193 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 NTRK3Q16288 839 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 PCNX4Q63HM2 1172 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 AFG1LQ8WV93 481 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 VWCEQ96DN2 955 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-210ENST00000560383 GRXCR1A8MXD5 290 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 STXBP3O00186 592 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 PBX2P40425 430 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 GNPTABQ3T906 1256 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 PPTC7Q8NI37 304 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 SCLYQ96I15 445 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 MSRAQ9UJ68 235 aa17.42■□□□□ 0.38
SNRPA1-210ENST00000560383 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 PRPF3O43395 683 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 IFNAR1P17181 557 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 NAPAP54920 295 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 SP2Q02086 613 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 BFSP2Q13515 415 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms