RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PABPC5Q96DU9 382 aaKnown RBP23.14■■□□□ 1.29
RABGGTA-214ENST00000560163 KCNH6Q9H252 994 aa23.14■■□□□ 1.29
RABGGTA-214ENST00000560163 PPFIA4O75335 1185 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 AMHP03971 560 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 ZP2Q05996 745 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 PTPROQ16827 1216 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 MYOCDQ8IZQ8 938 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 BANK1Q8NDB2 785 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 FAM227BQ96M60 508 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 SAMD11Q96NU1 681 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 UIMC1Q96RL1 719 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 PCDHB15Q9Y5E8 787 aa23.13■■□□□ 1.29
RABGGTA-214ENST00000560163 A0A0D9SFI3 127 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 RSPH10B2B2RC85 870 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 RGS20O76081 388 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 NR3C2P08235 984 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 RSPH10BP0C881 870 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 HAND2P61296 217 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 CSPP1Q1MSJ5 1256 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 MCMDC2Q4G0Z9 681 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 TIGD5Q53EQ6 642 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 MYSM1Q5VVJ2 828 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 MFSD6Q6ZSS7 791 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 DGKHQ86XP1 1220 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 MCF2L2Q86YR7 1114 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 DHX37Q8IY37 1157 aaKnown RBP23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 ADGRF4Q8IZF3 695 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 TOP1MTQ969P6 601 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 FBXL18Q96ME1 805 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 PRKAG3Q9UGI9 489 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 MRVI1Q9Y6F6 885 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 COL4A6Q14031 1691 aa23.12■■□□□ 1.29
RABGGTA-214ENST00000560163 EIF2AK2P19525 551 aaKnown RBP23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 HOXC8P31273 242 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 TCEAL5Q5H9L2 206 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 ARHGEF16Q5VV41 709 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 TBC1D10CQ8IV04 446 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 OSBPL7Q9BZF2 842 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 PXMP2Q9NR77 195 aa23.11■■□□□ 1.29
RABGGTA-214ENST00000560163 OPLAHO14841 1288 aa23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 GPM6BQ13491 265 aa23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 HSDL1Q3SXM5 330 aa23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 ZNF589Q86UQ0 364 aaPredicted RBP23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 ZKSCAN3Q9BRR0 538 aa23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 C16orf70Q9BSU1 422 aa23.1■■□□□ 1.29
RABGGTA-214ENST00000560163 USP34Q70CQ2 3546 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 ZNF318Q5VUA4 2279 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 LTBRP36941 435 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 THPOP40225 353 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 GHRHRQ02643 423 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 QRICH1Q2TAL8 776 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 CELF3Q5SZQ8 465 aaKnown RBP23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 TICAM2Q86XR7 235 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 ADHFE1Q8IWW8 467 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 TMEM192Q8IY95 271 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 PNMA1Q8ND90 353 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 ANKS1AQ92625 1134 aa23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
RABGGTA-214ENST00000560163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 HSD17B4P51659 736 aa23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 SP2Q02086 613 aa23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 FBXO11Q86XK2 927 aa23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 NSUN3Q9H649 340 aaKnown RBP23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 JMJD4Q9H9V9 463 aa23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 NLRC5Q86WI3 1866 aa23.08■■□□□ 1.29
RABGGTA-214ENST00000560163 NEDD4P46934 1319 aa23.08■■□□□ 1.28
RABGGTA-214ENST00000560163 CTC1Q2NKJ3 1217 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 STOX1Q6ZVD7 989 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 ESR2Q92731 530 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 SPATA33Q96N06 139 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 YME1L1Q96TA2 773 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 PDCD2LQ9BRP1 358 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 FAM50BQ9Y247 325 aa23.07■■□□□ 1.28
RABGGTA-214ENST00000560163 MYH6P13533 1939 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 IRS1P35568 1242 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 KCNV1Q6PIU1 500 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 HFE2Q6ZVN8 426 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 VSIG10LQ86VR7 867 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 SEPT8Q92599 483 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 RNF41Q9H4P4 317 aaPredicted RBP23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 ATG2AQ2TAZ0 1938 aa23.06■■□□□ 1.28
RABGGTA-214ENST00000560163 MYO7AQ13402 2215 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 RALGAPA2Q2PPJ7 1873 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 GGPS1O95749 300 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 CFBP00751 764 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 LINC00271P0C7V0 271 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 PDE1AP54750 535 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 ASPRV1Q53RT3 343 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 ATP6V0A1Q93050 837 aa23.05■■□□□ 1.28
RABGGTA-214ENST00000560163 C17orf102A2RUQ5 167 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 C5orf67F2Z3F1 127 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 H3BRB1 525 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 TREHO43280 583 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 SORBS3O60504 671 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 UPP2O95045 317 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 TGFB3P10600 412 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 NMIQ13287 307 aaPredicted RBP23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 SMAD2Q15796 467 aaKnown RBP23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 RNPEPQ9H4A4 650 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms