RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TPP2P29144 1249 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 GRIK1P39086 918 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 SCAND1P57086 179 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 RPL11P62913 178 aaKnown RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 CYP27A1Q02318 531 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 DSG1Q02413 1049 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 KLF1Q13351 362 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 UBE4AQ14139 1066 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 ZNF174Q15697 407 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 FAM102BQ5T8I3 360 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 BROXQ5VW32 411 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 OGFOD3Q6PK18 319 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 ZNF765Q7L2R6 523 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 RCBTB1Q8NDN9 531 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 TTC8Q8TAM2 541 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 USP33Q8TEY7 942 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 SLC5A5Q92911 643 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 UBE2FQ969M7 185 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 FUBP3Q96I24 572 aaKnown RBP eCLIP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 LRGUKQ96M69 825 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 PTCHD1Q96NR3 888 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 RTFDC1Q9BY42 306 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 CELF4Q9BZC1 486 aaKnown RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 GPR62Q9BZJ7 368 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 CDH19Q9H159 772 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 PCIF1Q9H4Z3 704 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 TOMM22Q9NS69 142 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 AP5S1Q9NUS5 200 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 C14orf119Q9NWQ9 140 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 OXSMQ9NWU1 459 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 MKS1Q9NXB0 559 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 H2AFY2Q9P0M6 372 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 B4GALT6Q9UBX8 382 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 DUSP13Q9UII6 198 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 NOC2LQ9Y3T9 749 aaKnown RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 TIMM13Q9Y5L4 95 aaPredicted RBP2.98□□□□□ -1.93
GABPB1-209ENST00000559100 NPFFR2Q9Y5X5 522 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 COMMD10Q9Y6G5 202 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 CAPN6Q9Y6Q1 641 aa2.98□□□□□ -1.93
GABPB1-209ENST00000559100 A0A1W2PQ27 194 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 A0A1W2PQ64 194 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 A0A1W2PQC6 194 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 A0A1W2PQD8 194 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 HMX2A2RU54 273 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 KCNK3O14649 394 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 NPHS1O60500 1241 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 HIP1RO75146 1068 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 IL33O95760 270 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CFBP00751 764 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CKMP06732 381 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 NBPF7P0C2Y1 421 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 U2AF1L5P0DN76 240 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 PF4V1P10720 104 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 ENDOUP21128 410 aaKnown RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 BCL6P41182 706 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 RECQLP46063 649 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SESN3P58005 492 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 U2AF1Q01081 240 aaKnown RBP eCLIP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CYP4F3Q08477 520 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SPIRE1Q08AE8 756 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 LSAMPQ13449 338 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SAFB2Q14151 953 aaKnown RBP eCLIP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 MBTPS1Q14703 1052 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 INF2Q27J81 1249 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SYCP2LQ5T4T6 812 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SEZ6L2Q6UXD5 910 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CYP2R1Q6VVX0 501 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 C16orf59Q7L2K0 433 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 WAPLQ7Z5K2 1190 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TXNRD3Q86VQ6 643 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TSPYL5Q86VY4 417 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CLEC10AQ8IUN9 316 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TPH2Q8IWU9 490 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TCEAL8Q8IYN2 117 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 FAM9AQ8IZU1 332 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 ARMC10Q8N2F6 343 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 FAM181AQ8N9Y4 354 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 CLIP3Q96DZ5 547 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TRMT2BQ96GJ1 504 aaKnown RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 TMEM169Q96HH4 297 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 MEGF10Q96KG7 1140 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SCYL1Q96KG9 808 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 MFSD14AQ96MC6 490 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 HEXIM2Q96MH2 286 aaKnown RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 FAM83CQ9BQN1 747 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 MENTQ9BUN1 341 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 JAM3Q9BX67 310 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 DUSP15Q9H1R2 295 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SP110Q9HB58 689 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 ARNT2Q9HBZ2 717 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 ATG3Q9NT62 314 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 STOML1Q9UBI4 398 aa2.97□□□□□ -1.93
GABPB1-209ENST00000559100 PPARGC1AQ9UBK2 798 aaKnown RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 COA3Q9Y2R0 106 aaPredicted RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 OAS3Q9Y6K5 1087 aaKnown RBP2.97□□□□□ -1.93
GABPB1-209ENST00000559100 SLC12A8A0AV02 714 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 FAM170BA6NMN3 283 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 GOLGA8AA7E2F4 631 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 GOLGA8BA8MQT2 603 aa2.96□□□□□ -1.94
GABPB1-209ENST00000559100 WASH4PA8MWX3 477 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms