RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
SNX1-204ENST00000559061 SORBS3O60504 671 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 MMP1P03956 469 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 ARP10275 920 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 CIITAP33076 1130 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 MCM2P49736 904 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 TTLL4Q14679 1199 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
SNX1-204ENST00000559061 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 GLT8D2Q9H1C3 349 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
SNX1-204ENST00000559061 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 MEIS1O00470 390 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 STAM2O75886 525 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 HOXD8P13378 290 aaPredicted RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 ACLYP53396 1101 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 SNX17Q15036 470 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 KCNA10Q16322 511 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 FSCN1Q16658 493 aaKnown RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 MYSM1Q5VVJ2 828 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 AFG1LQ8WV93 481 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 MBOAT7Q96N66 472 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
SNX1-204ENST00000559061 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
SNX1-204ENST00000559061 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 A6NJR5 290 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 B4DLN1 442 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 NKRFO15226 690 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNX1-204ENST00000559061 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 FIBPO43427 364 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 TDP2O95551 362 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 GGPS1O95749 300 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 ASGR1P07306 291 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 MMP3P08254 477 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 GJB2P29033 226 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 INF2Q27J81 1249 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 LRRC26Q2I0M4 334 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 CEP55Q53EZ4 464 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 DIS3L2Q8IYB7 885 aaKnown RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 WASF1Q92558 559 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 C11orf49Q9H6J7 331 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
SNX1-204ENST00000559061 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
SNX1-204ENST00000559061 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 SLC37A4O43826 429 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 GH1P01241 217 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
SNX1-204ENST00000559061 CAPN2P17655 700 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 KRT2P35908 639 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 PURAQ00577 322 aaKnown RBP13.04□□□□□ -0.32
SNX1-204ENST00000559061 MTMR1Q13613 665 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 CXCL17Q6UXB2 119 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 NIPA1Q7RTP0 329 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 RNF180Q86T96 592 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 KAT2BQ92831 832 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 GJA10Q969M2 543 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 TSEN34Q9BSV6 310 aaKnown RBP13.04□□□□□ -0.32
SNX1-204ENST00000559061 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
SNX1-204ENST00000559061 CYP3A7-CYP3A51PA0A087WV96 503 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 CCNE2O96020 404 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 TGFB3P10600 412 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 CYP3A7P24462 503 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 PSMC6P62333 389 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 GNPTABQ3T906 1256 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 PPTC7Q8NI37 304 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 GPR20Q99678 358 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 SENP7Q9BQF6 1050 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 SENP6Q9GZR1 1112 aaPredicted RBP13.03□□□□□ -0.32
SNX1-204ENST00000559061 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
SNX1-204ENST00000559061 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms