RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 NR3C2P08235 984 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 CLTBP09497 229 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 CALM1P0DP23 149 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 CALM2P0DP24 149 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 CALM3P0DP25 149 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 HSPA4P34932 840 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 GNAQP50148 359 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 TTLL4Q14679 1199 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 STXBP2Q15833 593 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 UBE2SQ16763 222 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 DUSP28Q4G0W2 176 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
TPM1-216ENST00000558910 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 RGS22Q8NE09 1264 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
TPM1-216ENST00000558910 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 RTEL1Q9NZ71 1219 aa13.86□□□□□ -0.19
TPM1-216ENST00000558910 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
TPM1-216ENST00000558910 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 RAG1P15918 1043 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 EDNRBP24530 442 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 HSD17B4P51659 736 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 SCFD2Q8WU76 684 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 CUL5Q93034 780 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 GDF15Q99988 308 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 LZTS2Q9BRK4 669 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 SPZ1Q9BXG8 430 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
TPM1-216ENST00000558910 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 ARVCFO00192 962 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 ITGB8P26012 769 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
TPM1-216ENST00000558910 CDC27P30260 824 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 PGM5Q15124 567 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 PGBD1Q96JS3 809 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 UPF3BQ9BZI7 483 aaKnown RBP13.84□□□□□ -0.19
TPM1-216ENST00000558910 TRPV6Q9H1D0 765 aa13.84□□□□□ -0.19
TPM1-216ENST00000558910 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
TPM1-216ENST00000558910 SOX1O00570 391 aaPredicted RBP13.83□□□□□ -0.2
TPM1-216ENST00000558910 DTNBO60941 627 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 CCND2P30279 289 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 ADD1P35611 737 aaKnown RBP13.83□□□□□ -0.2
TPM1-216ENST00000558910 METAP2P50579 478 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM1-216ENST00000558910 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM1-216ENST00000558910 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
TPM1-216ENST00000558910 SP4Q02446 784 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 STK3Q13188 491 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 ITGA7Q13683 1181 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 SNX17Q15036 470 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 ERICH6BQ5W0A0 696 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 SGMS1Q86VZ5 419 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 LRCH3Q96II8 777 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 IWS1Q96ST2 819 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 MTA3Q9BTC8 594 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
TPM1-216ENST00000558910 RBM47A0AV96 593 aaKnown RBP13.82□□□□□ -0.2
TPM1-216ENST00000558910 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
TPM1-216ENST00000558910 GH1P01241 217 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
TPM1-216ENST00000558910 PSMA5P28066 241 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 CPT1AP50416 773 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 NAPAP54920 295 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 TRAF1Q13077 416 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
TPM1-216ENST00000558910 ALG1Q9BT22 464 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
TPM1-216ENST00000558910 RABGEF1Q9UJ41 708 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 ELP1O95163 1332 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 CNTNAP5Q8WYK1 1306 aa13.82□□□□□ -0.2
TPM1-216ENST00000558910 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
TPM1-216ENST00000558910 CCL23P55773 120 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 C9orf50Q5SZB4 431 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 WWC2Q6AWC2 1192 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
TPM1-216ENST00000558910 TDHQ8IZJ6 230 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 PHKBQ93100 1093 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 UIMC1Q96RL1 719 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 MTG1Q9BT17 334 aaPredicted RBP13.81□□□□□ -0.2
TPM1-216ENST00000558910 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 NCOA5Q9HCD5 579 aaKnown RBP13.81□□□□□ -0.2
TPM1-216ENST00000558910 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
TPM1-216ENST00000558910 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
TPM1-216ENST00000558910 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 MEIS2O14770 477 aa13.8□□□□□ -0.2
TPM1-216ENST00000558910 NKRFO15226 690 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM1-216ENST00000558910 CABYRO75952 493 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms