RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GTF2IRD1Q9UHL9 959 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 SLC4A7Q9Y6M7 1214 aa15.71■□□□□ 0.11
VPS18-203ENST00000558855 RFXAPO00287 272 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 NBNO60934 754 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 MBTPS1Q14703 1052 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 MFSD10Q14728 455 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 CELF3Q5SZQ8 465 aaKnown RBP15.7■□□□□ 0.1
VPS18-203ENST00000558855 CREB3L3Q68CJ9 461 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
VPS18-203ENST00000558855 PPTC7Q8NI37 304 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 PPM1EQ8WY54 764 aa15.7■□□□□ 0.1
VPS18-203ENST00000558855 ATG2AQ2TAZ0 1938 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 ERICH2A1L162 156 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
VPS18-203ENST00000558855 MEIS2O14770 477 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 ATP2A2P16615 1042 aaKnown RBP15.69■□□□□ 0.1
VPS18-203ENST00000558855 RAB30Q15771 203 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 DGKDQ16760 1214 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 KIAA0753Q2KHM9 967 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 CATIPQ7Z7H3 387 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 RPUSD2Q8IZ73 545 aaKnown RBP15.69■□□□□ 0.1
VPS18-203ENST00000558855 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 SPZ1Q9BXG8 430 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 XIRP2A4UGR9 3374 aa15.69■□□□□ 0.1
VPS18-203ENST00000558855 LCHNA4D1U4 455 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 DDAH1O94760 285 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 CA3P07451 260 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 CKBP12277 381 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
VPS18-203ENST00000558855 CCND2P30279 289 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 DEFB103AP81534 67 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 RBL2Q08999 1139 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 LAMC2Q13753 1193 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 KRT40Q6A162 431 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 TRIM50Q86XT4 487 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 TCEANC2Q96MN5 208 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 MAP3K20Q9NYL2 800 aaKnown RBP15.68■□□□□ 0.1
VPS18-203ENST00000558855 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 PCDHA11Q9Y5I1 949 aa15.68■□□□□ 0.1
VPS18-203ENST00000558855 TCF20Q9UGU0 1960 aaKnown RBP15.67■□□□□ 0.1
VPS18-203ENST00000558855 LOXHD1Q8IVV2 1947 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 PFKMP08237 780 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 SART3Q15020 963 aaKnown RBP15.67■□□□□ 0.1
VPS18-203ENST00000558855 CCDC85BQ15834 202 aaPredicted RBP15.67■□□□□ 0.1
VPS18-203ENST00000558855 PPP2R2DQ66LE6 453 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 INPP4AQ96PE3 977 aaPredicted RBP15.67■□□□□ 0.1
VPS18-203ENST00000558855 MTIF3Q9H2K0 278 aaKnown RBP15.67■□□□□ 0.1
VPS18-203ENST00000558855 SLC28A3Q9HAS3 691 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 NOD1Q9Y239 953 aa15.67■□□□□ 0.1
VPS18-203ENST00000558855 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
VPS18-203ENST00000558855 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 NLRC5Q86WI3 1866 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 LGALS2P05162 132 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 SELPP16109 830 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 RFC2P35250 354 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 BFSP2Q13515 415 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 UBE2SQ16763 222 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 ADCK5Q3MIX3 580 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 ZNF618Q5T7W0 954 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 HERC6Q8IVU3 1022 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 RETREG2Q8NC44 543 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 AFAP1L1Q8TED9 768 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
VPS18-203ENST00000558855 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 FTOQ9C0B1 505 aaKnown RBP eCLIP15.66■□□□□ 0.1
VPS18-203ENST00000558855 ANO2Q9NQ90 1003 aa15.66■□□□□ 0.1
VPS18-203ENST00000558855 KAT6AQ92794 2004 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 SPATA31C2B4DYI2 1134 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 CXCL10P02778 98 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 HOXC8P31273 242 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 ICAM3P32942 547 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
VPS18-203ENST00000558855 TAP1Q03518 808 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 CYFIP1Q7L576 1253 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 CCDC82Q8N4S0 544 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 SAMD3Q8N6K7 520 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 C7orf31Q8N865 590 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
VPS18-203ENST00000558855 CAGE1Q8TC20 777 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
VPS18-203ENST00000558855 ATP9AO75110 1047 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 IGFBP4P22692 258 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 MCM5P33992 734 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 PTK7Q13308 1070 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
VPS18-203ENST00000558855 BMP2KLQ5H9B9 411 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 NFXL1Q6ZNB6 911 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 TMTC3Q6ZXV5 915 aa15.64■□□□□ 0.09
VPS18-203ENST00000558855 RRP36Q96EU6 259 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms