RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
AP4E1-202ENST00000558439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP4E1-202ENST00000558439 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
AP4E1-202ENST00000558439 ABL1P00519 1130 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 SRGNP10124 158 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 LLGL1Q15334 1064 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 OTUD6BQ8N6M0 293 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 AMNQ9BXJ7 453 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 FLT1P17948 1338 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 ITIH6Q6UXX5 1313 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 TNS2Q63HR2 1409 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 GAS7O60861 476 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 RAD54LQ92698 747 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 STAT1P42224 750 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 LRRC63Q05C16 580 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
AP4E1-202ENST00000558439 LACRTQ9GZZ8 138 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 DPH5Q9H2P9 285 aa17■□□□□ 0.31
AP4E1-202ENST00000558439 POTEFA5A3E0 1075 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 COASYQ13057 564 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 CDC37Q16543 378 aaPredicted RBP16.99■□□□□ 0.31
AP4E1-202ENST00000558439 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 PTF1AQ7RTS3 328 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 FUT8Q9BYC5 575 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
AP4E1-202ENST00000558439 CCT5P48643 541 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 MNAT1P51948 309 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 USP14P54578 494 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 ABCB5Q2M3G0 1257 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 SELENOSQ9BQE4 189 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 ANO3Q9BYT9 981 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 GRIK5Q16478 980 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 MICALCLQ6ZW33 695 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 CTTNBP2NLQ9P2B4 639 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 EIF3CLB5ME19 914 aaKnown RBP16.99■□□□□ 0.31
AP4E1-202ENST00000558439 KRIT1O00522 736 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 GBP6Q6ZN66 633 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 EIF3CQ99613 913 aaKnown RBP16.99■□□□□ 0.31
AP4E1-202ENST00000558439 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
AP4E1-202ENST00000558439 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
AP4E1-202ENST00000558439 SASH3O75995 380 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 H2AFZP0C0S5 128 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 GGCXP38435 758 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 H2AFVQ71UI9 128 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 LRRC37A3O60309 1634 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 ZBTB5O15062 677 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 CYTH3O43739 400 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 CYP2C19P33261 490 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 PRPHP41219 470 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 PRR5LQ6MZQ0 368 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 FAM178BQ8IXR5 827 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 CCDC26Q8TAB7 109 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 MTMR4Q9NYA4 1195 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 PALMO75781 387 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 GUF1Q8N442 669 aaKnown RBP16.98■□□□□ 0.31
AP4E1-202ENST00000558439 CAPS2Q9BXY5 557 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 ARHGEF10LQ9HCE6 1279 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 NFU1Q9UMS0 254 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 DAGLAQ9Y4D2 1042 aa16.98■□□□□ 0.31
AP4E1-202ENST00000558439 PVALEFA0A1B0GWK0 134 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 MYCLP12524 364 aaPredicted RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 TRAF1Q13077 416 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 SEPT2Q15019 361 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 IL17AQ16552 155 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 CCDC17Q96LX7 622 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 PPANQ9NQ55 473 aaKnown RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 PDHBP11177 359 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 NEFHP12036 1026 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 TTC31Q49AM3 519 aaPredicted RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 SLC37A4O43826 429 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 GFPT2O94808 682 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
AP4E1-202ENST00000558439 QRICH1Q2TAL8 776 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 LRRC1Q9BTT6 524 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 AP1M1Q9BXS5 423 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
AP4E1-202ENST00000558439 RNF225M0QZC1 329 aaPredicted RBP16.96■□□□□ 0.31
AP4E1-202ENST00000558439 LRRN2O75325 713 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms