RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 ZNF286BP0CG31 522 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 UBA1P22314 1058 aaKnown RBP14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 BFSP2Q13515 415 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 HSDL1Q3SXM5 330 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 XRRA1Q6P2D8 792 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 HERVK_113Q902F9 699 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 KAT2BQ92831 832 aa14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
CDC42BPB-202ENST00000558321 LAMA3Q16787 3333 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 ZBBXA8MT70 800 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 SPATA31C2B4DYI2 1134 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 NOP56O00567 594 aaKnown RBP14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 FIBPO43427 364 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 CPA1P15085 419 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 DNAJB2P25686 324 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 NEDD9Q14511 834 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 MFSD10Q14728 455 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 UBE2SQ16763 222 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 KIAA0753Q2KHM9 967 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 GDF6Q6KF10 455 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 BLOC1S2Q6QNY1 142 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 CCDC155Q8N6L0 562 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-202ENST00000558321 FRMPD4Q14CM0 1322 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 GRXCR1A8MXD5 290 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 PFKMP08237 780 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 IQCF3P0C7M6 154 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 ICAM3P32942 547 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 HSPA4P34932 840 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 RFC2P35250 354 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 NAPAP54920 295 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 RASIP1Q5U651 963 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 CYFIP1Q7L576 1253 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 TIFAQ96CG3 184 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 GUCD1Q96NT3 240 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 CDX2Q99626 313 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 EHMT1Q9H9B1 1298 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 MSRAQ9UJ68 235 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.13
CDC42BPB-202ENST00000558321 TMEM265A0A087WTH1 108 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 CCDC196A0A1B0GTZ2 297 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 F2P00734 622 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 ACTN1P12814 892 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 PSMA5P28066 241 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 SP4Q02446 784 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 APOBRQ0VD83 1088 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 Q6ZUG5 572 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 KCNB2Q92953 911 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 BCAS3Q9H6U6 928 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 CXXC1Q9P0U4 656 aaPredicted RBP14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 GTF2IRD1Q9UHL9 959 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
CDC42BPB-202ENST00000558321 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 H3BRB1 525 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 HAS3O00219 553 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 HOXD8P13378 290 aaPredicted RBP14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 PBX2P40425 430 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 SEMA3FQ13275 785 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 WWC2Q6AWC2 1192 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 GIMAP8Q8ND71 665 aaPredicted RBP14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 CAGE1Q8TC20 777 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 BRF1Q92994 677 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 USP26Q9BXU7 913 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 TUT1Q9H6E5 874 aaKnown RBP14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
CDC42BPB-202ENST00000558321 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 SMCO2A6NFE2 343 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 RPS6KB1P23443 525 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 CDC27P30260 824 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 ADCY7P51828 1080 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 RCAN1P53805 252 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 ZNF200P98182 395 aaPredicted RBP14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 FUT2Q10981 343 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 PTK7Q13308 1070 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 RAB30Q15771 203 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 UTP14CQ5TAP6 766 aaKnown RBP14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 AFAP1L1Q8TED9 768 aa14.18□□□□□ -0.14
CDC42BPB-202ENST00000558321 MYLIPQ8WY64 445 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms