RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 ALPK3Q96L96 1907 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 A6NJR5 290 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 ZEB2O60315 1214 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 GH1P01241 217 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
CDK12-203ENST00000558240 ITGB5P18084 799 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 CPT1AP50416 773 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 USP11P51784 963 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 LAMC2Q13753 1193 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 KCNA10Q16322 511 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
CDK12-203ENST00000558240 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 OR6J1Q8NGC5 347 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 COPS5Q92905 334 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 SNX21Q969T3 373 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 MXRA8Q9BRK3 442 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
CDK12-203ENST00000558240 MYADML2A6NDP7 307 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 MEIS1O00470 390 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 MMP1P03956 469 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 PTGS1P23219 599 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 CIITAP33076 1130 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 ZNF76P36508 570 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 ACLYP53396 1101 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 SP2Q02086 613 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 ARHGAP1Q07960 439 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 MTMR1Q13613 665 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 CUL4AQ13619 759 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 NEDD9Q14511 834 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 CELF3Q5SZQ8 465 aaKnown RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 GIMAP8Q8ND71 665 aaPredicted RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 C8orf76Q96K31 380 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
CDK12-203ENST00000558240 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.71□□□□□ -0.21
CDK12-203ENST00000558240 KAT6AQ92794 2004 aa13.71□□□□□ -0.22
CDK12-203ENST00000558240 SCN10AQ9Y5Y9 1956 aa13.71□□□□□ -0.22
CDK12-203ENST00000558240 KPNA6O60684 536 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 CABYRO75952 493 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 ASGR1P07306 291 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
CDK12-203ENST00000558240 KRT2P35908 639 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 BEX3Q00994 111 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 KRT40Q6A162 431 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 FBXO18Q8NFZ0 1043 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 CYP2W1Q8TAV3 490 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 TBCKQ8TEA7 893 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 SENP6Q9GZR1 1112 aaPredicted RBP13.7□□□□□ -0.22
CDK12-203ENST00000558240 KCNH7Q9NS40 1196 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
CDK12-203ENST00000558240 ELP1O95163 1332 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 CCDC194A0A1B0GVG4 234 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 A0A1W2PQ45 241 aaPredicted RBP13.69□□□□□ -0.22
CDK12-203ENST00000558240 A0A1W2PQY0 241 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 FAM86B1E9PN63 330 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 GGPS1O95749 300 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 FAM86B2P0C5J1 330 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 KCNA2P16389 499 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK12-203ENST00000558240 SAFBQ15424 915 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK12-203ENST00000558240 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 CEP290O15078 2479 aa13.69□□□□□ -0.22
CDK12-203ENST00000558240 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
CDK12-203ENST00000558240 IGLV3-22A0A075B6J6 115 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
CDK12-203ENST00000558240 EDIL3O43854 480 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 ATP9AO75110 1047 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 MMP3P08254 477 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 ARP10275 920 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 CYP3A7P24462 503 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 GJB2P29033 226 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 SETQ01105 290 aaPredicted RBP13.68□□□□□ -0.22
CDK12-203ENST00000558240 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 CYFIP1Q7L576 1253 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 DIS3L2Q8IYB7 885 aaKnown RBP13.68□□□□□ -0.22
CDK12-203ENST00000558240 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
CDK12-203ENST00000558240 INTS4Q96HW7 963 aaKnown RBP13.68□□□□□ -0.22
CDK12-203ENST00000558240 SPATA33Q96N06 139 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms