RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SH2B2O14492 632 aaPredicted RBP16.37■□□□□ 0.21
SNX6-210ENST00000557341 SLC27A2O14975 620 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 GGPS1O95749 300 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 TGFB3P10600 412 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
SNX6-210ENST00000557341 PSEN2P49810 448 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 MFSD10Q14728 455 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 KIAA0753Q2KHM9 967 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 HSDL1Q3SXM5 330 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 CELF3Q5SZQ8 465 aaKnown RBP16.37■□□□□ 0.21
SNX6-210ENST00000557341 MYSM1Q5VVJ2 828 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 TMTC2Q8N394 836 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 CTAGE1Q96RT6 745 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 PRDM12Q9H4Q4 367 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 YBX2Q9Y2T7 364 aaKnown RBP16.37■□□□□ 0.21
SNX6-210ENST00000557341 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
SNX6-210ENST00000557341 STAM2O75886 525 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 CALM1P0DP23 149 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 CALM2P0DP24 149 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 CALM3P0DP25 149 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 GNAQP50148 359 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 RABGGTBP53611 331 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 RBL2Q08999 1139 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 PPP2R2DQ66LE6 453 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 CREB3L3Q68CJ9 461 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 LRRC8DQ7L1W4 858 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
SNX6-210ENST00000557341 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNX6-210ENST00000557341 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
SNX6-210ENST00000557341 HAS3O00219 553 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 SORBS3O60504 671 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 PPFIA4O75335 1185 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 BAIAP3O94812 1187 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 LIFRP42702 1097 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 NECTIN1Q15223 517 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 DHX38Q92620 1227 aaKnown RBP16.35■□□□□ 0.21
SNX6-210ENST00000557341 CUL5Q93034 780 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 COL25A1Q9BXS0 654 aaPredicted RBP16.35■□□□□ 0.21
SNX6-210ENST00000557341 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
SNX6-210ENST00000557341 PIK3CDO00329 1044 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 PLEKHA8P1O95397 391 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 PARNO95453 639 aaKnown RBP16.34■□□□□ 0.21
SNX6-210ENST00000557341 SELPP16109 830 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 RXRAP19793 462 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 MRPS9P82933 396 aaKnown RBP16.34■□□□□ 0.21
SNX6-210ENST00000557341 SP2Q02086 613 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 PTK7Q13308 1070 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 USP38Q8NB14 1042 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
SNX6-210ENST00000557341 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
SNX6-210ENST00000557341 INPP4AQ96PE3 977 aaPredicted RBP16.34■□□□□ 0.21
SNX6-210ENST00000557341 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
SNX6-210ENST00000557341 LOXHD1Q8IVV2 1947 aa16.33■□□□□ 0.21
SNX6-210ENST00000557341 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
SNX6-210ENST00000557341 FIBPO43427 364 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 CKBP12277 381 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 MYOGP15173 224 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 ICAM3P32942 547 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 KCNJ6P48051 423 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
SNX6-210ENST00000557341 PHOSPHO2Q8TCD6 241 aa16.33■□□□□ 0.2
SNX6-210ENST00000557341 CA3P07451 260 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
SNX6-210ENST00000557341 NEDD9Q14511 834 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 USP17L6PQ6QN14 398 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 METTL7BQ6UX53 244 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 C16orf70Q9BSU1 422 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 XIRP2A4UGR9 3374 aa16.32■□□□□ 0.2
SNX6-210ENST00000557341 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 RALGAPA2Q2PPJ7 1873 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 H3BRB1 525 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 MEIS2O14770 477 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 LGALS2P05162 132 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 IGFBP4P22692 258 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 CNKSR3Q6P9H4 555 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 SKAP1Q86WV1 359 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
SNX6-210ENST00000557341 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
SNX6-210ENST00000557341 TUT1Q9H6E5 874 aaKnown RBP16.31■□□□□ 0.2
SNX6-210ENST00000557341 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms