RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SPRED2Q7Z698 418 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 VSIG10LQ86VR7 867 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
VRTN-202ENST00000557177 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 IL31RAQ8NI17 732 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 WNT8BQ93098 351 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 ALG1Q9BT22 464 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 TCF20Q9UGU0 1960 aaKnown RBP16.76■□□□□ 0.27
VRTN-202ENST00000557177 LCHNA4D1U4 455 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 LPXNO60711 386 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 HOXA13P31271 388 aaPredicted RBP16.75■□□□□ 0.27
VRTN-202ENST00000557177 DEFB103AP81534 67 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 GRM4Q14833 912 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 CELF3Q5SZQ8 465 aaKnown RBP16.75■□□□□ 0.27
VRTN-202ENST00000557177 KRT40Q6A162 431 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 TMCO2Q7Z6W1 182 aaPredicted RBP16.75■□□□□ 0.27
VRTN-202ENST00000557177 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
VRTN-202ENST00000557177 CYP21A2P08686 494 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 TGFB3P10600 412 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 MYCLP12524 364 aaPredicted RBP16.74■□□□□ 0.27
VRTN-202ENST00000557177 UBA1P22314 1058 aaKnown RBP16.74■□□□□ 0.27
VRTN-202ENST00000557177 PDE4AP27815 886 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 SP2Q02086 613 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 GRB10Q13322 594 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 HIC1Q14526 733 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 MBTPS1Q14703 1052 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 AAK1Q2M2I8 961 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 TTC22Q5TAA0 569 aa16.74■□□□□ 0.27
VRTN-202ENST00000557177 BAZ2BQ9UIF8 2168 aaKnown RBP16.73■□□□□ 0.27
VRTN-202ENST00000557177 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 CYTH3O43739 400 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 GJB5O95377 273 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 GGPS1O95749 300 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 KCNQ1P51787 676 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 ZNF200P98182 395 aaPredicted RBP16.73■□□□□ 0.27
VRTN-202ENST00000557177 TROAPQ12815 778 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 TRDNQ13061 729 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
VRTN-202ENST00000557177 ZNF618Q5T7W0 954 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 GPKOWQ92917 476 aaPredicted RBP eCLIP16.73■□□□□ 0.27
VRTN-202ENST00000557177 SPATA33Q96N06 139 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 NECAB3Q96P71 396 aaPredicted RBP16.73■□□□□ 0.27
VRTN-202ENST00000557177 PIGSQ96S52 555 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 C16orf70Q9BSU1 422 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 SIP14410 1827 aa16.73■□□□□ 0.27
VRTN-202ENST00000557177 FRMPD4Q14CM0 1322 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 GCOM1H8Y6P7 765 aaPredicted RBP16.72■□□□□ 0.27
VRTN-202ENST00000557177 EFCAB14O75071 495 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 CCND2P30279 289 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 HOXC8P31273 242 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 PTH1RQ03431 593 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 TRAF1Q13077 416 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
VRTN-202ENST00000557177 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 YTHDC1Q96MU7 727 aaKnown RBP16.72■□□□□ 0.27
VRTN-202ENST00000557177 RAD9AQ99638 391 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 COG5Q9UP83 839 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
VRTN-202ENST00000557177 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
VRTN-202ENST00000557177 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 RBAK-RBAKDNI3L0D1 243 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.27
VRTN-202ENST00000557177 SORBS3O60504 671 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 COL9A1P20849 921 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 IKBKEQ14164 716 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 ZBED2Q9BTP6 218 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 LMCD1Q9NZU5 365 aa16.71■□□□□ 0.27
VRTN-202ENST00000557177 LGR5O75473 907 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 CHMLP26374 656 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 ERVK-21P61565 698 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 MRPS9P82933 396 aaKnown RBP16.7■□□□□ 0.26
VRTN-202ENST00000557177 WTAPQ15007 396 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 GDPD5Q8WTR4 605 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
VRTN-202ENST00000557177 BCAS3Q9H6U6 928 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
VRTN-202ENST00000557177 DOCK5Q9H7D0 1870 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 ERICH2A1L162 156 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 LINC01553A4QN01 128 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 E7EWF7 191 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 H3BRB1 525 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 STAM2O75886 525 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 LGALS2P05162 132 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 ICAM3P32942 547 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 HLA-CQ95604 372 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 INPP4AQ96PE3 977 aaPredicted RBP16.69■□□□□ 0.26
VRTN-202ENST00000557177 TUT1Q9H6E5 874 aaKnown RBP16.69■□□□□ 0.26
VRTN-202ENST00000557177 SUGCTQ9HAC7 445 aa16.69■□□□□ 0.26
VRTN-202ENST00000557177 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms