RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 CUL3Q13618 768 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CCDC92Q53HC0 331 aaPredicted RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 GORABQ5T7V8 394 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 SH3PXD2AQ5TCZ1 1133 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 MFSD4BQ5TF39 518 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 WDR78Q5VTH9 848 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 NUTM2GQ5VZR2 741 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CCDC102BQ68D86 513 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 INTS3Q68E01 1043 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 GET4Q7L5D6 327 aaPredicted RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CHD1LQ86WJ1 897 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 IQCF2Q8IXL9 164 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 DZIP1LQ8IYY4 767 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 MYOCDQ8IZQ8 938 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CNTROBQ8N137 903 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 ZGPATQ8N5A5 531 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CCHCR1Q8TD31 782 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 ARHGAP45Q92619 1136 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 BHMTQ93088 406 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 LENG1Q96BZ8 264 aaPredicted RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 PPP1R14BQ96C90 147 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 HSH2DQ96JZ2 352 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 PPP1R13BQ96KQ4 1090 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 SUSD3Q96L08 255 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 ANKRD27Q96NW4 1050 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 FMNL2Q96PY5 1086 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 MPHOSPH6Q99547 160 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 CARD11Q9BXL7 1154 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 TSGA10Q9BZW7 698 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 TRIM4Q9C037 500 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 BICC1Q9H694 974 aaKnown RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 VCPKMTQ9H867 229 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 PDE11AQ9HCR9 933 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 JPH1Q9HDC5 661 aaPredicted RBP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 DDX21Q9NR30 783 aaKnown RBP eCLIP5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 SWAP70Q9UH65 585 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 ATP8A1Q9Y2Q0 1164 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 GMEB1Q9Y692 573 aa5.16□□□□□ -1.58
HNRNPC-229ENST00000557157 KIAA0100Q14667 2235 aaKnown RBP5.15□□□□□ -1.58
HNRNPC-229ENST00000557157 SRRM3A6NNA2 597 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 USP27XA6NNY8 438 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 NPHP1O15259 732 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 MEFVO15553 781 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 CREB3O43889 395 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 CEP104O60308 925 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 GADD45BO75293 160 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 RASSF9O75901 435 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SELPP16109 830 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 DESP17661 470 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 LMNB1P20700 586 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SYT1P21579 422 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 MCM3P25205 808 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SH3BGRP55822 239 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 PCSK7Q16549 785 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 CCDC40Q4G0X9 1142 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 EAPPQ56P03 285 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 CCDC181Q5TID7 509 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 VPS53Q5VIR6 699 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SFMBT2Q5VUG0 894 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 NUGGCQ68CJ6 796 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 MIS18BP1Q6P0N0 1132 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 GALNT15Q8N3T1 639 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 LARGE2Q8N3Y3 721 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 MSANTD4Q8NCY6 345 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 LEO1Q8WVC0 666 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SMARCC1Q92922 1105 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 RBM41Q96IZ5 413 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 RUFY1Q96T51 708 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 GORASP1Q9BQQ3 440 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 MOV10L1Q9BXT6 1211 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 NAT10Q9H0A0 1025 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 OSBPL5Q9H0X9 879 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 NUP62CLQ9H1M0 184 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 TSPAN10Q9H1Z9 355 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 TAF1DQ9H5J8 278 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 FAM204AQ9H8W3 233 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 CD248Q9HCU0 757 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 LUC7LQ9NQ29 371 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 DDX19AQ9NUU7 478 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SPATA7Q9P0W8 599 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 DDX20Q9UHI6 824 aaKnown RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 RAB21Q9UL25 225 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 BARX2Q9UMQ3 279 aaPredicted RBP5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 SLC6A14Q9UN76 642 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 TMEM98Q9Y2Y6 226 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 HCN4Q9Y3Q4 1203 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 PCDHGC5Q9Y5F6 944 aa5.15□□□□□ -1.59
HNRNPC-229ENST00000557157 ATRXP46100 2492 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 F8VZ95 297 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 ZSCAN12O43309 604 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 ZEB2O60315 1214 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 PRMT3O60678 531 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 SMNDC1O75940 238 aaKnown RBP eCLIP5.14□□□□□ -1.595e-6■□□□□ 10.8
HNRNPC-229ENST00000557157 CCDC175P0C221 793 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 ZFXP17010 805 aaPredicted RBP5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 RPL13P26373 211 aaKnown RBP5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 PPP2R1AP30153 589 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 CCT5P48643 541 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 PPP2R3AQ06190 1150 aa5.14□□□□□ -1.59
HNRNPC-229ENST00000557157 ACTN3Q08043 901 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms