RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 AMHP03971 560 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 ZNF286BP0CG31 522 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 MBTPS1Q14703 1052 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 PTPROQ16827 1216 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 KCNV1Q6PIU1 500 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 DBF4BQ8NFT6 615 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 WNT8BQ93098 351 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 RILPL2Q969X0 211 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 C17orf80Q9BSJ5 609 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
SHMT2-223ENST00000556689 TRIP12Q14669 1992 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-223ENST00000556689 GRXCR2A6NFK2 248 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 PRR33A8MZF0 331 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 KDM4AO75164 1064 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 MYCLP12524 364 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 HOXD8P13378 290 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 ALADP13716 330 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 SSTR3P32745 418 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 THPOP40225 353 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 HTRA4P83105 476 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 PUS10Q3MIT2 529 aaKnown RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 CELF3Q5SZQ8 465 aaKnown RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 MYSM1Q5VVJ2 828 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 PTCRAQ6ISU1 281 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 MYOCDQ8IZQ8 938 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 MRPL38Q96DV4 380 aaKnown RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 SPATA33Q96N06 139 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 ZSCAN10Q96SZ4 725 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-223ENST00000556689 AMNQ9BXJ7 453 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 ZSWIM5Q9P217 1185 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 TANC1Q9C0D5 1861 aa14.75□□□□□ -0.05
SHMT2-223ENST00000556689 TGFB3P10600 412 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 IL9P15248 144 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 HSD17B4P51659 736 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 HIC1Q14526 733 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 EPC2Q52LR7 807 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 PLEKHG4Q58EX7 1191 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 STOX1Q6ZVD7 989 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 SERINC5Q86VE9 423 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 VSIG10LQ86VR7 867 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 SAMD11Q96NU1 681 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
SHMT2-223ENST00000556689 MAP3K20Q9NYL2 800 aaKnown RBP14.74□□□□□ -0.05
SHMT2-223ENST00000556689 B4E1Z4 1266 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 SORBS3O60504 671 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 RGS20O76081 388 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 GGPS1O95749 300 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 SDSP20132 328 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-223ENST00000556689 SAMD3Q8N6K7 520 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 ENAHQ8N8S7 591 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-223ENST00000556689 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-223ENST00000556689 SEPT8Q92599 483 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 ATP6V0A1Q93050 837 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 TOP1MTQ969P6 601 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 UIMC1Q96RL1 719 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 C16orf70Q9BSU1 422 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 MLXIPQ9HAP2 919 aa14.73□□□□□ -0.05
SHMT2-223ENST00000556689 C17orf102A2RUQ5 167 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 H3BNC9 293 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 H3BRB1 525 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 RBAK-RBAKDNI3L0D1 243 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 OPLAHO14841 1288 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 SP2Q02086 613 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 GHRHRQ02643 423 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 HDAC1Q13547 482 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-223ENST00000556689 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 NEK9Q8TD19 979 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 YME1L1Q96TA2 773 aa14.72□□□□□ -0.05
SHMT2-223ENST00000556689 TUT1Q9H6E5 874 aaKnown RBP14.72□□□□□ -0.05
SHMT2-223ENST00000556689 H3BQ06 376 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-223ENST00000556689 UPP2O95045 317 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 GPM6BQ13491 265 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 PGM5Q15124 567 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 CSPP1Q1MSJ5 1256 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 TIGD5Q53EQ6 642 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 ALYREFQ86V81 257 aaKnown RBP14.71□□□□□ -0.05
SHMT2-223ENST00000556689 STAG2Q8N3U4 1231 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 PABPC5Q96DU9 382 aaKnown RBP14.71□□□□□ -0.05
SHMT2-223ENST00000556689 UBAC1Q9BSL1 405 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 KRT23Q9C075 422 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 FAM50BQ9Y247 325 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
SHMT2-223ENST00000556689 PTPRSQ13332 1948 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 KLRF2D3W0D1 207 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 ZBTB5O15062 677 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 TREHO43280 583 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 CAND2O75155 1236 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 SMIM10L2AP0DMW4 78 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 SMIM10L2BP0DMW5 78 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 GNAT1P11488 350 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 CCND2P30279 289 aa14.7□□□□□ -0.06
SHMT2-223ENST00000556689 HOXA13P31271 388 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-223ENST00000556689 IMMTQ16891 758 aaKnown RBP14.7□□□□□ -0.06
SHMT2-223ENST00000556689 TCEAL5Q5H9L2 206 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms