RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CDH23Q9H251 3354 aa9.33□□□□□ -0.92
VTI1B-206ENST00000556461 KIAA1217Q5T5P2 1943 aa9.33□□□□□ -0.92
VTI1B-206ENST00000556461 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 TLR3O15455 904 aaKnown RBP9.32□□□□□ -0.92
VTI1B-206ENST00000556461 KPNA6O60684 536 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 DTNBO60941 627 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 ZNF286BP0CG31 522 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 ACRP10323 421 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 HOXD8P13378 290 aaPredicted RBP9.32□□□□□ -0.92
VTI1B-206ENST00000556461 CSF2RAP15509 400 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 ITGB5P18084 799 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PSMA5P28066 241 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
VTI1B-206ENST00000556461 ICAM3P32942 547 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 RCAN1P53805 252 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 NAPAP54920 295 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 CCL23P55773 120 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 EVCP57679 992 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 FPGSQ05932 587 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 LAMC2Q13753 1193 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 HIC1Q14526 733 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PKN1Q16512 942 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 BRDTQ58F21 947 aaPredicted RBP9.32□□□□□ -0.92
VTI1B-206ENST00000556461 FAM47CQ5HY64 1035 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PCNX4Q63HM2 1172 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 MFSD5Q6N075 450 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PPTC7Q8NI37 304 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PHKBQ93100 1093 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 NOC4LQ9BVI4 516 aaKnown RBP9.32□□□□□ -0.92
VTI1B-206ENST00000556461 TM6SF1Q9BZW5 370 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 WNT8AQ9H1J5 351 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 RIC8AQ9NPQ8 531 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PCDHA6Q9UN73 950 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 PCDHA8Q9Y5H6 950 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 COL6A3P12111 3177 aa9.32□□□□□ -0.92
VTI1B-206ENST00000556461 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 ATP9AO75110 1047 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 PSEN2P49810 448 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 DGKDQ16760 1214 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 PFKFB3Q16875 520 aaPredicted RBP9.31□□□□□ -0.92
VTI1B-206ENST00000556461 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
VTI1B-206ENST00000556461 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 NFRKBQ6P4R8 1299 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 Q7L0L9 218 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 CYFIP1Q7L576 1253 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 CYP2W1Q8TAV3 490 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 SCLYQ96I15 445 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 SPATA33Q96N06 139 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
VTI1B-206ENST00000556461 ALG1Q9BT22 464 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 HIPK3Q9H422 1215 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 BARHL2Q9NY43 387 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 UBIAD1Q9Y5Z9 338 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 CYP46A1Q9Y6A2 500 aa9.31□□□□□ -0.92
VTI1B-206ENST00000556461 CHD9Q3L8U1 2897 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 SPDYE3A6NKU9 549 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 HAS3O00219 553 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 PRPF3O43395 683 aaKnown RBP9.3□□□□□ -0.92
VTI1B-206ENST00000556461 FIBPO43427 364 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 STAM2O75886 525 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 F2P00734 622 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 TGFB3P10600 412 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 SCG2P13521 617 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 KCNA2P16389 499 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 CLK2P49760 499 aaKnown RBP9.3□□□□□ -0.92
VTI1B-206ENST00000556461 ADCY7P51828 1080 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 ZNF200P98182 395 aaPredicted RBP9.3□□□□□ -0.92
VTI1B-206ENST00000556461 STK3Q13188 491 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 MFSD10Q14728 455 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 TMEM240Q5SV17 173 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 FAM109BQ6ICB4 259 aaPredicted RBP9.3□□□□□ -0.92
VTI1B-206ENST00000556461 KCNV1Q6PIU1 500 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
VTI1B-206ENST00000556461 GPR20Q99678 358 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 C16orf70Q9BSU1 422 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 SLC26A6Q9BXS9 759 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 SEZ6LQ9BYH1 1024 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 MLXIPQ9HAP2 919 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 PDRG1Q9NUG6 133 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 PKD2L1Q9P0L9 805 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 HDAC6Q9UBN7 1215 aa9.3□□□□□ -0.92
VTI1B-206ENST00000556461 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 PPFIA4O75335 1185 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 LGALS2P05162 132 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 IFNAR1P17181 557 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 SP4Q02446 784 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
VTI1B-206ENST00000556461 PPIGQ13427 754 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1B-206ENST00000556461 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 JAKMIP3Q5VZ66 844 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 XRRA1Q6P2D8 792 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 METTL7BQ6UX53 244 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 ZNF365Q70YC5 407 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 SESTD1Q86VW0 696 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 TRIM50Q86XT4 487 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 TMEM199Q8N511 208 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 RASGRP4Q8TDF6 673 aa9.29□□□□□ -0.92
VTI1B-206ENST00000556461 WNT8BQ93098 351 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms