RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PTGS1P23219 599 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 MRPL12P52815 198 aaKnown RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 GJA9P57773 515 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 TNFAIP2Q03169 654 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 PDE4DQ08499 809 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 STK3Q13188 491 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 LRRC41Q15345 812 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 ARHGEF16Q5VV41 709 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 CCSAPQ6IQ19 270 aaPredicted RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 CCDC62Q6P9F0 684 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 TBC1D32Q96NH3 1257 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 EPAS1Q99814 870 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 RIC8AQ9NPQ8 531 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 XPNPEP3Q9NQH7 507 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
SRP54-210ENST00000556380 Q9Y3F1 56 aa11.1□□□□□ -0.63
SRP54-210ENST00000556380 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 DNM1LO00429 736 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 ARIH2O95376 493 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 PGK1P00558 417 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 CST5P28325 142 aaPredicted RBP11.09□□□□□ -0.63
SRP54-210ENST00000556380 NAPAP54920 295 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 MRPS9P82933 396 aaKnown RBP11.09□□□□□ -0.63
SRP54-210ENST00000556380 ST3GAL1Q11201 340 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 PGM5Q15124 567 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 STXBP2Q15833 593 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 UBE2SQ16763 222 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
SRP54-210ENST00000556380 NECAB2Q7Z6G3 386 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 MPHOSPH6Q99547 160 aaKnown RBP11.09□□□□□ -0.63
SRP54-210ENST00000556380 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 ZMYND12Q9H0C1 365 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 SLKQ9H2G2 1235 aaPredicted RBP11.09□□□□□ -0.63
SRP54-210ENST00000556380 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
SRP54-210ENST00000556380 MYADML2A6NDP7 307 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
SRP54-210ENST00000556380 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
SRP54-210ENST00000556380 RABEP1Q15276 862 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 SCFD2Q8WU76 684 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 CUL5Q93034 780 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 WNT2BQ93097 391 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
SRP54-210ENST00000556380 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 PHF24Q9UPV7 400 aa11.08□□□□□ -0.64
SRP54-210ENST00000556380 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 CPLX1O14810 134 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 DTNBO60941 627 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 DEXIO95424 95 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 FDPSP14324 419 aaKnown RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 CCND2P30279 289 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 ADCY7P51828 1080 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 NPY5RQ15761 445 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 SEPT14Q6ZU15 432 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 RNF180Q86T96 592 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 AIFM3Q96NN9 605 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 INPP4AQ96PE3 977 aaPredicted RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 GLT8D2Q9H1C3 349 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 C11orf49Q9H6J7 331 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
SRP54-210ENST00000556380 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 STK36Q9NRP7 1315 aa11.07□□□□□ -0.64
SRP54-210ENST00000556380 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 NKRFO15226 690 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRP54-210ENST00000556380 EDIL3O43854 480 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 STAM2O75886 525 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 CDKL5O76039 1030 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 FOSP01100 380 aaPredicted RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 TXNP10599 105 aaKnown RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 MYCLP12524 364 aaPredicted RBP11.06□□□□□ -0.64
SRP54-210ENST00000556380 ICAM3P32942 547 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 SP2Q02086 613 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 TTLL4Q14679 1199 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 KCNA10Q16322 511 aa11.06□□□□□ -0.64
SRP54-210ENST00000556380 NOL8Q76FK4 1167 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms