RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
HNRNPC-224ENST00000556226 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 OPLAHO14841 1288 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 DDAH1O94760 285 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 NR3C2P08235 984 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 RFC2P35250 354 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 CHMP4BP1P59074 171 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 ARHGAP1Q07960 439 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 TCTN1Q2MV58 587 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 KCNV1Q6PIU1 500 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 ZNF654Q8IZM8 581 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 AFG1LQ8WV93 481 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 KAT2BQ92831 832 aa11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 DDX41Q9UJV9 622 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-224ENST00000556226 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 LPXNO60711 386 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 GH1P01241 217 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 MMP3P08254 477 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 TGFB3P10600 412 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 ACTN1P12814 892 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 SKIV2LQ15477 1246 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 PTGISQ16647 500 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 TSGA10IPQ3SY00 556 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 VSIG10LQ86VR7 867 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 PDCD2LQ9BRP1 358 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
HNRNPC-224ENST00000556226 CDC45O75419 566 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 DEFB103AP81534 67 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 GRB10Q13322 594 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 BFSP2Q13515 415 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 WNT8BQ93098 351 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
HNRNPC-224ENST00000556226 GTPBP6O43824 516 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 NBNO60934 754 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 STAM2O75886 525 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 HOXA13P31271 388 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 KRT32Q14532 448 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 PGM5Q15124 567 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 DGKDQ16760 1214 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
HNRNPC-224ENST00000556226 PIK3CDO00329 1044 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 TLL1O43897 1013 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 PPFIA4O75335 1185 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 ZNF286BP0CG31 522 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 SELPP16109 830 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 CCND2P30279 289 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 RBL2Q08999 1139 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 HIC1Q14526 733 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 MBTPS1Q14703 1052 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 AAK1Q2M2I8 961 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 TRIM71Q2Q1W2 868 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 XRRA1Q6P2D8 792 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 SKAP1Q86WV1 359 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 CAGE1Q8TC20 777 aa11.28□□□□□ -0.6
HNRNPC-224ENST00000556226 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.63e-9■■■□□ 18.6
HNRNPC-224ENST00000556226 CUL5Q93034 780 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms