RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PLA2G6O60733 806 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 GABBR2O75899 941 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 ICAM1P05362 532 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 POU3F3P20264 500 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 RFC2P35250 354 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 ALDH5A1P51649 535 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 TAP1Q03518 808 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 BAATQ14032 418 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 BRDTQ58F21 947 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 TMEM31Q5JXX7 168 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 PPP4R3BQ5MIZ7 849 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 HERC6Q8IVU3 1022 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 MORC4Q8TE76 937 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 HLA-CQ95604 372 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 SEC62Q99442 399 aaKnown RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 MTG1Q9BT17 334 aaPredicted RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 ADD3Q9UEY8 706 aaKnown RBP6.87□□□□□ -1.31
PRKCH-220ENST00000556164 COG5Q9UP83 839 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 NOD1Q9Y239 953 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 TRANK1O15050 2925 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 FRMPD2Q68DX3 1309 aaPredicted RBP6.86□□□□□ -1.31
PRKCH-220ENST00000556164 RCCD1A6NED2 376 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 FAM86C2PA6NEL3 165 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 NFIBO00712 420 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 TLL1O43897 1013 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 ARHGEF15O94989 841 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 IQCF3P0C7M6 154 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 CALML3P27482 149 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 SLC16A2P36021 539 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 KCNJ6P48051 423 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 GRB10Q13322 594 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 BFSP2Q13515 415 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 PPP2R5BQ15173 497 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 TSNAXIP1Q2TAA8 658 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 SLC30A10Q6XR72 485 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 PHOSPHO2Q8TCD6 241 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 FAM200AQ8TCP9 573 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 GDPD5Q8WTR4 605 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 DCAF4Q8WV16 495 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 MS4A3Q96HJ5 214 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 FSD1Q9BTV5 496 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 RANBP17Q9H2T7 1088 aaKnown RBP6.86□□□□□ -1.31
PRKCH-220ENST00000556164 IL17RBQ9NRM6 502 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 BDP1A6H8Y1 2624 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 MICAL3Q7RTP6 2002 aa6.86□□□□□ -1.31
PRKCH-220ENST00000556164 NLRC5Q86WI3 1866 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 LOC102724159A0A0B4J2E5 919 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRKCH-220ENST00000556164 RANBP6O60518 1105 aaKnown RBP6.85□□□□□ -1.31
PRKCH-220ENST00000556164 KDM4AO75164 1064 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 BAIAP3O94812 1187 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 PWP2Q15269 919 aaKnown RBP6.85□□□□□ -1.31
PRKCH-220ENST00000556164 PTGISQ16647 500 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 SYDE2Q5VT97 1194 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 NFRKBQ6P4R8 1299 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 SPRED2Q7Z698 418 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 CCDC155Q8N6L0 562 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 SCFD2Q8WU76 684 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 PIK3R5Q8WYR1 880 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 COPS5Q92905 334 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 MPHOSPH6Q99547 160 aaKnown RBP6.85□□□□□ -1.31
PRKCH-220ENST00000556164 ZBED2Q9BTP6 218 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 TOMM22Q9NS69 142 aa6.85□□□□□ -1.31
PRKCH-220ENST00000556164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRKCH-220ENST00000556164 LCHNA4D1U4 455 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 C19orf67A6NJJ6 358 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 KPNA6O60684 536 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 LPXNO60711 386 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 TXNP10599 105 aaKnown RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 PRSS12P56730 875 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 WDR5P61964 334 aaKnown RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 PTPN11Q06124 597 aaPredicted RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 PTK7Q13308 1070 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 MRPL58Q14197 206 aaKnown RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 RRP12Q5JTH9 1297 aaKnown RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 C6orf132Q5T0Z8 1188 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 C20orf194Q5TEA3 1177 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 TMCO2Q7Z6W1 182 aaPredicted RBP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 LRRN4Q8WUT4 740 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 CLEC4DQ8WXI8 215 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 KHSRPQ92945 711 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKCH-220ENST00000556164 MTUS1Q9ULD2 1270 aa6.84□□□□□ -1.31
PRKCH-220ENST00000556164 TTC41PQ6P2S7 1318 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 TLDC2A0PJX2 215 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 DDX11L8A8MPP1 907 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 B4DLN1 442 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 FOXP2O15409 715 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 HOXA2O43364 376 aa6.83□□□□□ -1.32
PRKCH-220ENST00000556164 MARCH6O60337 910 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms