RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SLC1A4P43007 532 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 OAZ1P54368 228 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 STK3Q13188 491 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 PKP1Q13835 747 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 KCTD1Q719H9 257 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 SLC43A3Q8NBI5 491 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 UIMC1Q96RL1 719 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
CHGA-205ENST00000556098 NCOR1O75376 2440 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
CHGA-205ENST00000556098 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
CHGA-205ENST00000556098 KRT85P78386 507 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 IQSEC1Q6DN90 963 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 TMCO2Q7Z6W1 182 aaPredicted RBP12.73□□□□□ -0.37
CHGA-205ENST00000556098 GDPD5Q8WTR4 605 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 HLA-CQ95604 372 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
CHGA-205ENST00000556098 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CHGA-205ENST00000556098 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 CCPG1Q9ULG6 757 aa12.73□□□□□ -0.37
CHGA-205ENST00000556098 ATG2AQ2TAZ0 1938 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 KIF28PB7ZC32 967 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 TLL1O43897 1013 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 KCNJ6P48051 423 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 TFAP4Q01664 338 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 GRB10Q13322 594 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 COL9A3Q14050 684 aaPredicted RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 SEC23AQ15436 765 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 RRP12Q5JTH9 1297 aaKnown RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 CATIPQ7Z7H3 387 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 DGKHQ86XP1 1220 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHGA-205ENST00000556098 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 SLC9A7Q96T83 725 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
CHGA-205ENST00000556098 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 COG5Q9UP83 839 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 TRANK1O15050 2925 aa12.72□□□□□ -0.37
CHGA-205ENST00000556098 ZNF536O15090 1300 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
CHGA-205ENST00000556098 PFKMP08237 780 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 IFNAR1P17181 557 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
CHGA-205ENST00000556098 CPT1AP50416 773 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 TAP1Q03518 808 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 RTN1Q16799 776 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 TKFCQ3LXA3 575 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
CHGA-205ENST00000556098 FAM117BQ6P1L5 589 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 ALYREFQ86V81 257 aaKnown RBP12.71□□□□□ -0.37
CHGA-205ENST00000556098 HERC6Q8IVU3 1022 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 CYP39A1Q9NYL5 469 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
CHGA-205ENST00000556098 BDP1A6H8Y1 2624 aa12.71□□□□□ -0.38
CHGA-205ENST00000556098 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 CALML3P27482 149 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 ALDH5A1P51649 535 aaPredicted RBP12.7□□□□□ -0.38
CHGA-205ENST00000556098 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
CHGA-205ENST00000556098 GSE1Q14687 1217 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 NBPF20Q3BBV1 942 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 EP400NLQ6ZTU2 488 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHGA-205ENST00000556098 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
CHGA-205ENST00000556098 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms