RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
PCNX4-211ENST00000555929 A0A0G2JMZ2 1700 aa8.63□□□□□ -1.03
PCNX4-211ENST00000555929 ASTN1O14525 1302 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 COL11A1P12107 1806 aaPredicted RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 SORBS3O60504 671 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 F13A1P00488 732 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 HOXC6P09630 235 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 XRCC5P13010 732 aaKnown RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 PDIA4P13667 645 aaKnown RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 NCLP19338 710 aaKnown RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 U2AF2P26368 475 aaKnown RBP eCLIP8.62□□□□□ -1.039e-7■■□□□ 12.6
PCNX4-211ENST00000555929 GRK4P32298 578 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 MCM7P33993 719 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 SREBF1P36956 1147 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 PRMT2P55345 433 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 NUCB2P80303 420 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 GHRHRQ02643 423 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 CEBPZQ03701 1054 aaKnown RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 TRIM32Q13049 653 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 NBR1Q14596 966 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 ZNF174Q15697 407 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 PRR16Q569H4 304 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 PCNX4Q63HM2 1172 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 FAM173BQ6P4H8 233 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 NLRX1Q86UT6 975 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 VSIG10LQ86VR7 867 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 FBXO16Q8IX29 292 aaPredicted RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 SH3TC2Q8TF17 1288 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 TRIB2Q92519 343 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 FGD4Q96M96 766 aa8.62□□□□□ -1.03
PCNX4-211ENST00000555929 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.62□□□□□ -1.03
PCNX4-211ENST00000555929 RPTORQ8N122 1335 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
PCNX4-211ENST00000555929 TDP2O95551 362 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 BRD1O95696 1058 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 SNAI1O95863 264 aaPredicted RBP8.61□□□□□ -1.03
PCNX4-211ENST00000555929 HMGCRP04035 888 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 USP11P51784 963 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 MRPS9P82933 396 aaKnown RBP8.61□□□□□ -1.03
PCNX4-211ENST00000555929 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
PCNX4-211ENST00000555929 RESTQ13127 1097 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 IRF5Q13568 498 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 GNPTABQ3T906 1256 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 SLC9C1Q4G0N8 1177 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 CEP55Q53EZ4 464 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 PPP1R15BQ5SWA1 713 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 OLFML2BQ68BL8 750 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 XRRA1Q6P2D8 792 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 BRAPQ7Z569 592 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 PLA2G4DQ86XP0 818 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 TEX2Q8IWB9 1127 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 CYP2W1Q8TAV3 490 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 MXRA8Q9BRK3 442 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 WDR11Q9BZH6 1224 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 CRISPLD2Q9H0B8 497 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 CHMP5Q9NZZ3 219 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 ZDHHC9Q9Y397 364 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 MRVI1Q9Y6F6 885 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 PARP14Q460N5 1801 aa8.61□□□□□ -1.03
PCNX4-211ENST00000555929 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 INHAP05111 366 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 CYP3A4P08684 503 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 TXNP10599 105 aaKnown RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 ITGB5P18084 799 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 EDNRBP24530 442 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 MTMR1Q13613 665 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 RILPL1Q5EBL4 403 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 DMRTA1Q5VZB9 504 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 ANO1Q5XXA6 986 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 MAMDC4Q6UXC1 1216 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 MSL3Q8N5Y2 521 aaKnown RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 ZNF396Q96N95 335 aaPredicted RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 KCNK17Q96T54 332 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 NAP1L4Q99733 375 aaKnown RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 ABHD16BQ9H3Z7 469 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 VTA1Q9NP79 307 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 TFIP11Q9UBB9 837 aaKnown RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 DDX25Q9UHL0 483 aaKnown RBP8.6□□□□□ -1.03
PCNX4-211ENST00000555929 PCDHB6Q9Y5E3 794 aa8.6□□□□□ -1.03
PCNX4-211ENST00000555929 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 LOC102724159A0A0B4J2E5 919 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-211ENST00000555929 FAM86B1E9PN63 330 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 DDX39AO00148 427 aaKnown RBP8.59□□□□□ -1.03
PCNX4-211ENST00000555929 MEIS1O00470 390 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 WNT7AO00755 349 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 SLC37A4O43826 429 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 STAM2O75886 525 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 RGS20O76081 388 aa8.59□□□□□ -1.03
PCNX4-211ENST00000555929 BAG4O95429 457 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms