RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 METTL24Q5JXM2 366 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 CWF19L1Q69YN2 538 aaKnown RBP6.97□□□□□ -1.29
NEK9-207ENST00000555763 BLOC1S3Q6QNY0 202 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 CCDC105Q8IYK2 499 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 MMP19Q99542 508 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
NEK9-207ENST00000555763 HINFPQ9BQA5 517 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 RTKNQ9BST9 563 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 PI4KBQ9UBF8 816 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 NOD1Q9Y239 953 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 GPSM3Q9Y4H4 160 aa6.97□□□□□ -1.29
NEK9-207ENST00000555763 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 ELL2O00472 640 aaPredicted RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 LINC01565O15544 149 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 RRP1P56182 461 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 PTK2Q05397 1052 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 COASYQ13057 564 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 GPM6BQ13491 265 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 ECM1Q16610 540 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 PTPRNQ16849 979 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 CCDC144BQ3MJ40 725 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 TSGA10IPQ3SY00 556 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 G2E3Q7L622 706 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 DZIP1Q86YF9 867 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 C8orf58Q8NAV2 365 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 ZNF384Q8TF68 577 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 DNAAF4Q8WXU2 420 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 PHF7Q9BWX1 381 aaPredicted RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 FTOQ9C0B1 505 aaKnown RBP eCLIP6.96□□□□□ -1.3
NEK9-207ENST00000555763 DHX36Q9H2U1 1008 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
NEK9-207ENST00000555763 SPAG17Q6Q759 2223 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
NEK9-207ENST00000555763 TICRRQ7Z2Z1 1910 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 LAMA1P25391 3075 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 CFAP46Q8IYW2 2715 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 C2orf16Q68DN1 1984 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 DCDC2BA2VCK2 349 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 SLC25A27O95847 323 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 GH2P01242 217 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 PROS1P07225 676 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 SUPT20HL2P0C7V6 817 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 SEC13P55735 322 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 PSMC6P62333 389 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
NEK9-207ENST00000555763 ACVR2BQ13705 512 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 COG2Q14746 738 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 ACER1Q8TDN7 264 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.95□□□□□ -1.3
NEK9-207ENST00000555763 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 KATNBL1Q9H079 304 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 ABHD16BQ9H3Z7 469 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 HOXC10Q9NYD6 342 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 CLEC1BQ9P126 229 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 ANGPTL2Q9UKU9 493 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
NEK9-207ENST00000555763 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
NEK9-207ENST00000555763 R4GN57 208 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 KIAA1217Q5T5P2 1943 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 GREB1LQ9C091 1923 aaPredicted RBP6.95□□□□□ -1.3
NEK9-207ENST00000555763 PDS5AQ29RF7 1337 aaKnown RBP6.95□□□□□ -1.3
NEK9-207ENST00000555763 PIEZO2Q9H5I5 2752 aa6.95□□□□□ -1.3
NEK9-207ENST00000555763 TTC3P53804 2025 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
NEK9-207ENST00000555763 ARP10275 920 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 JUNDP17535 347 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 ATF7P17544 494 aaPredicted RBP6.94□□□□□ -1.3
NEK9-207ENST00000555763 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
NEK9-207ENST00000555763 PMLP29590 882 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 CTHP32929 405 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 GTF2F1P35269 517 aaKnown RBP eCLIP6.94□□□□□ -1.3
NEK9-207ENST00000555763 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 SHC2P98077 582 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 ADAM15Q13444 863 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 PLS1Q14651 629 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 GPNMBQ14956 572 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 TMEM132BQ14DG7 1078 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
NEK9-207ENST00000555763 LRRFIP1Q32MZ4 808 aaKnown RBP6.94□□□□□ -1.3
NEK9-207ENST00000555763 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 CNKSR3Q6P9H4 555 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 MAGEB6Q8N7X4 407 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 SUMF1Q8NBK3 374 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 LPIN2Q92539 896 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 KAZALD1Q96I82 304 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 RPGRIP1Q96KN7 1286 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 CRBNQ96SW2 442 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 LMAN2LQ9H0V9 348 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 BCL11AQ9H165 835 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 INCENPQ9NQS7 918 aa6.94□□□□□ -1.3
NEK9-207ENST00000555763 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms