RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 GPKOWQ92917 476 aaPredicted RBP eCLIP28.15■■■□□ 2.1
PRKCH-216ENST00000555542 PSTPIP2Q9H939 334 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 FRMPD4Q14CM0 1322 aa28.15■■■□□ 2.1
PRKCH-216ENST00000555542 PIK3CDO00329 1044 aa28.14■■■□□ 2.1
PRKCH-216ENST00000555542 PSEN2P49810 448 aa28.14■■■□□ 2.1
PRKCH-216ENST00000555542 EXOSC10Q01780 885 aaKnown RBP28.14■■■□□ 2.1
PRKCH-216ENST00000555542 MFSD10Q14728 455 aa28.14■■■□□ 2.1
PRKCH-216ENST00000555542 RTN1Q16799 776 aa28.14■■■□□ 2.1
PRKCH-216ENST00000555542 SLC17A8Q8NDX2 589 aa28.14■■■□□ 2.1
PRKCH-216ENST00000555542 TMEM265A0A087WTH1 108 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 ZBBXA8MT70 800 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 NOP56O00567 594 aaKnown RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 MEIS2O14770 477 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 MRPS9P82933 396 aaKnown RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 SP2Q02086 613 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 KIAA0753Q2KHM9 967 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 HSDL1Q3SXM5 330 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 RASIP1Q5U651 963 aa28.13■■■□□ 2.09
PRKCH-216ENST00000555542 GDF6Q6KF10 455 aaPredicted RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 CDX2Q99626 313 aaPredicted RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 TTYH1Q9H313 450 aaPredicted RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 LAMA2P24043 3122 aaKnown RBP28.13■■■□□ 2.09
PRKCH-216ENST00000555542 KLF18A0A0U1RQI7 1052 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 GRXCR1A8MXD5 290 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 PITPNM1O00562 1244 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 PPFIA4O75335 1185 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 PFKMP08237 780 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 SESTD1Q86VW0 696 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 TIFAQ96CG3 184 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 CXXC1Q9P0U4 656 aaPredicted RBP28.12■■■□□ 2.09
PRKCH-216ENST00000555542 BRPF3Q9ULD4 1205 aa28.12■■■□□ 2.09
PRKCH-216ENST00000555542 TANC1Q9C0D5 1861 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 GOLGA8AA7E2F4 631 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 GOLGA8BA8MQT2 603 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 FIBPO43427 364 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 F2P00734 622 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 NEDD9Q14511 834 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 PCNX4Q63HM2 1172 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 JAKMIP1Q96N16 626 aaKnown RBP28.11■■■□□ 2.09
PRKCH-216ENST00000555542 INPP4AQ96PE3 977 aaPredicted RBP28.11■■■□□ 2.09
PRKCH-216ENST00000555542 HDAC6Q9UBN7 1215 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 GTF2IRD1Q9UHL9 959 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 SCN5AQ14524 2016 aa28.11■■■□□ 2.09
PRKCH-216ENST00000555542 SPDYE3A6NKU9 549 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 REC8O95072 547 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 RFC2P35250 354 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 UBE2SQ16763 222 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 XRRA1Q6P2D8 792 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 NLRX1Q86UT6 975 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 PBX4Q9BYU1 374 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 FTOQ9C0B1 505 aaKnown RBP eCLIP28.1■■■□□ 2.09
PRKCH-216ENST00000555542 MSRAQ9UJ68 235 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 SLC4A7Q9Y6M7 1214 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 CNTNAP5Q8WYK1 1306 aa28.1■■■□□ 2.09
PRKCH-216ENST00000555542 SPATA31C2B4DYI2 1134 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 IQCF3P0C7M6 154 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 ACTN1P12814 892 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 ICAM3P32942 547 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 PBX2P40425 430 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 CAGE1Q8TC20 777 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 MYLIPQ8WY64 445 aa28.09■■■□□ 2.09
PRKCH-216ENST00000555542 HOXD8P13378 290 aaPredicted RBP28.08■■■□□ 2.09
PRKCH-216ENST00000555542 CPA1P15085 419 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 HSPA4P34932 840 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 NAPAP54920 295 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 RAB30Q15771 203 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 BLOC1S2Q6QNY1 142 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 CYFIP1Q7L576 1253 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 ZNF576Q9H609 170 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 EHMT1Q9H9B1 1298 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 DOCK5Q9H7D0 1870 aa28.08■■■□□ 2.09
PRKCH-216ENST00000555542 HAS3O00219 553 aa28.07■■■□□ 2.08
PRKCH-216ENST00000555542 SP4Q02446 784 aa28.07■■■□□ 2.08
PRKCH-216ENST00000555542 METTL7BQ6UX53 244 aa28.07■■■□□ 2.08
PRKCH-216ENST00000555542 AFAP1L1Q8TED9 768 aa28.07■■■□□ 2.08
PRKCH-216ENST00000555542 SNX14Q9Y5W7 946 aa28.07■■■□□ 2.08
PRKCH-216ENST00000555542 TRIP12Q14669 1992 aaPredicted RBP28.07■■■□□ 2.08
PRKCH-216ENST00000555542 FOSL2P15408 326 aa28.06■■■□□ 2.08
PRKCH-216ENST00000555542 WWC2Q6AWC2 1192 aa28.06■■■□□ 2.08
PRKCH-216ENST00000555542 Q6ZUG5 572 aa28.06■■■□□ 2.08
PRKCH-216ENST00000555542 BCAS3Q9H6U6 928 aa28.06■■■□□ 2.08
PRKCH-216ENST00000555542 V9GY48 417 aaPredicted RBP28.06■■■□□ 2.08
PRKCH-216ENST00000555542 LGALS2P05162 132 aa28.05■■■□□ 2.08
PRKCH-216ENST00000555542 METAP2P50579 478 aaKnown RBP eCLIP28.05■■■□□ 2.08
PRKCH-216ENST00000555542 SEMA3FQ13275 785 aa28.05■■■□□ 2.08
PRKCH-216ENST00000555542 C16orf70Q9BSU1 422 aa28.05■■■□□ 2.08
PRKCH-216ENST00000555542 PCDHA6Q9UN73 950 aa28.05■■■□□ 2.08
PRKCH-216ENST00000555542 PCDHA8Q9Y5H6 950 aa28.05■■■□□ 2.08
PRKCH-216ENST00000555542 GBF1Q92538 1859 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 H3BRB1 525 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 SELPP16109 830 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 RCAN1P53805 252 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 APOBRQ0VD83 1088 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 LRRC8DQ7L1W4 858 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 GIMAP8Q8ND71 665 aaPredicted RBP28.04■■■□□ 2.08
PRKCH-216ENST00000555542 KCNB2Q92953 911 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 BRF1Q92994 677 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 CDHR1Q96JP9 859 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 CTAGE1Q96RT6 745 aa28.04■■■□□ 2.08
PRKCH-216ENST00000555542 USP26Q9BXU7 913 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms