RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 KCNA6P17658 529 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 TFE3P19532 575 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 CASP1P29466 404 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 CHMP4BP1P59074 171 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 NEXNQ0ZGT2 675 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 TBX2Q13207 712 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 GPS2Q13227 327 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 GRIN2CQ14957 1233 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 SLC39A14Q15043 492 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PTPAQ15257 358 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PLEKHO1Q53GL0 409 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 WDR44Q5JSH3 913 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 BEND6Q5SZJ8 279 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 COL13A1Q5TAT6 717 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 RAD9BQ6WBX8 426 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ATG9AQ7Z3C6 839 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 SLITRK4Q8IW52 837 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 LILRB2Q8N423 598 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 RABGGTAQ92696 567 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 GOLGA1Q92805 767 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PMEPA1Q969W9 287 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 DEPDC7Q96QD5 511 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 MPHOSPH8Q99549 860 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 MYL10Q9BUA6 226 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 METTL22Q9BUU2 404 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 OXCT2Q9BYC2 517 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PUS3Q9BZE2 481 aaKnown RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 POLMQ9NP87 494 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ZFATQ9P243 1243 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PRKAG3Q9UGI9 489 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 HPSEQ9Y251 543 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 NFE2L3Q9Y4A8 694 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ARID1BQ8NFD5 2236 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ANKARQ7Z5J8 1434 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 SLIT1O75093 1534 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 MYH8P13535 1937 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 hCG_2014768A0A024R1R8 64 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 A0A1B0GTH6 734 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 RNF113AO15541 343 aaKnown RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CCP110O43303 1012 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CBFA2T2O43439 604 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ATP8B1O43520 1251 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CUTAO60888 179 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 THBS1P07996 1170 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 TPM1P09493 284 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 IFIT1P09914 478 aaKnown RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ADORA1P30542 326 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ACTN2P35609 894 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 GRIA4P48058 902 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 LIG3P49916 1009 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 KCNQ4P56696 695 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 STX17P56962 302 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 VSNL1P62760 191 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CAMK2GQ13555 558 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 COL9A2Q14055 689 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 SPECC1LQ69YQ0 1117 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF790Q6PG37 636 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 OLFM4Q6UX06 510 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 SV2BQ7L1I2 683 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 LRP10Q7Z4F1 713 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 BRAPQ7Z569 592 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CNNM3Q8NE01 707 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 OR13H1Q8NG92 308 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA5Q8TBA6 731 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 EXOC4Q96A65 974 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 PLD4Q96BZ4 506 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF496Q96IT1 587 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CDC5LQ99459 802 aaKnown RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 MAP3K14Q99558 947 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ZKSCAN3Q9BRR0 538 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 ALG1Q9BT22 464 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 GSX2Q9BZM3 304 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 PUS7LQ9H0K6 701 aaKnown RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CRISPLD1Q9H336 500 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 C19orf44Q9H6X5 657 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 PCDH12Q9NPG4 1184 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 BRD7Q9NPI1 651 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 HELLSQ9NRZ9 838 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 KLHL42Q9P2K6 505 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 MAN1B1Q9UKM7 699 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 KCNH3Q9ULD8 1083 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 HDAC5Q9UQL6 1122 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 AKAP2Q9Y2D5 859 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 PLEKHG1Q9ULL1 1385 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 C5P01031 1676 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 LMO7Q8WWI1 1683 aa2.9□□□□□ -1.95
PRPF39-207ENST00000554439 AFDNP55196 1824 aaKnown RBP2.9□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC151A5D8V7 595 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 LRRIQ3A6PVS8 624 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 POLR2DO15514 142 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 STX10O60499 249 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 MMP20O60882 483 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 PAGE1O75459 146 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TUBB4AP04350 444 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 TARSP26639 723 aaKnown RBP2.89□□□□□ -1.95
PRPF39-207ENST00000554439 CDC25AP30304 524 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 GUCY1A2P33402 732 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 IGBP1P78318 339 aa2.89□□□□□ -1.95
PRPF39-207ENST00000554439 FOXO4P98177 505 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms