RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 ARHGEF16Q5VV41 709 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 WWC2Q6AWC2 1192 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 RASGRP2Q7LDG7 609 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 REXO1Q8N1G1 1221 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 NECAB1Q8N987 351 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 FAM133AQ8N9E0 248 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 PHKBQ93100 1093 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 RMDN3Q96TC7 470 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 TINF2Q9BSI4 451 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 ALG1Q9BT22 464 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 CPVLQ9H3G5 476 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 PCDHA4Q9UN74 947 aa8.36□□□□□ -1.07
HNRNPC-210ENST00000554417 H3BQV1 296 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 NFIBO00712 420 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 AXIN1O15169 862 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 ADCY3O60266 1144 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 EIF3JO75822 258 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 TGFB3P10600 412 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 CYP2B6P20813 491 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 GRK4P32298 578 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 USP11P51784 963 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 PRKCZQ05513 592 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 PDE4DQ08499 809 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 GNL2Q13823 731 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 CTC1Q2NKJ3 1217 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 SLC9C1Q4G0N8 1177 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 MUM1L1Q5H9M0 696 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 NLRX1Q86UT6 975 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 GIMAP8Q8ND71 665 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 MORC4Q8TE76 937 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 PIBF1Q8WXW3 757 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 PHF20Q9BVI0 1012 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 VTA1Q9NP79 307 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 RLFQ13129 1914 aa8.35□□□□□ -1.07
HNRNPC-210ENST00000554417 RPTORQ8N122 1335 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 CCDC194A0A1B0GVG4 234 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 MEIS2O14770 477 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 PPP1R11O60927 126 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 CTDNEP1O95476 244 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 MMP1P03956 469 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 CCND2P30279 289 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 KRT2P35908 639 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 ALDH5A1P51649 535 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 SNAP25P60880 206 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 ORC2Q13416 577 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 BRDTQ58F21 947 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 PCNX4Q63HM2 1172 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 BLIDQ8IZY5 108 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 FBXO18Q8NFZ0 1043 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 BIN2Q9UBW5 565 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 Q9Y3F1 56 aa8.34□□□□□ -1.07
HNRNPC-210ENST00000554417 ZNF236Q9UL36 1845 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 COBLO75128 1261 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 LARGE1O95461 756 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 NR3C2P08235 984 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 CYP3A4P08684 503 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 FDPSP14324 419 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 GCFC2P16383 781 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 EDNRBP24530 442 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 GJB2P29033 226 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 SETQ01105 290 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 FOXC1Q12948 553 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 NONOQ15233 471 aaKnown RBP eCLIP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 SLC35G1Q2M3R5 365 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 IQSEC1Q6DN90 963 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 MOXD1Q6UVY6 613 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 NIPA1Q7RTP0 329 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 SCFD2Q8WU76 684 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.088e-6■■□□□ 13.6
HNRNPC-210ENST00000554417 PDCD2LQ9BRP1 358 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 ARHGAP39Q9C0H5 1083 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 PXMP2Q9NR77 195 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 VPS54Q9P1Q0 977 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 FAM184BQ9ULE4 1060 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 NOL7Q9UMY1 257 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 PCDHA6Q9UN73 950 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 PCDHA8Q9Y5H6 950 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
HNRNPC-210ENST00000554417 FRMPD4Q14CM0 1322 aa8.32□□□□□ -1.08
HNRNPC-210ENST00000554417 hCG_1642624A0A1W2PR95 340 aa8.32□□□□□ -1.08
HNRNPC-210ENST00000554417 OPLAHO14841 1288 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms