RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
LETMD1-234ENST00000552645 PCDHA4Q9UN74 947 aa11.34□□□□□ -0.59
LETMD1-234ENST00000552645 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-234ENST00000552645 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-234ENST00000552645 TXNP10599 105 aaKnown RBP11.33□□□□□ -0.6
LETMD1-234ENST00000552645 SMPD1P17405 629 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 ZNF76P36508 570 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
LETMD1-234ENST00000552645 AP3B2Q13367 1082 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 TAF3Q5VWG9 929 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 AP5M1Q9H0R1 490 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 MRVI1Q9Y6F6 885 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 FRMPD4Q14CM0 1322 aa11.33□□□□□ -0.6
LETMD1-234ENST00000552645 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
LETMD1-234ENST00000552645 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
LETMD1-234ENST00000552645 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-234ENST00000552645 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
LETMD1-234ENST00000552645 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 PCNX4Q63HM2 1172 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 TLK2Q86UE8 772 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 ARRDC4Q8NCT1 418 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 COPS5Q92905 334 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 C8orf76Q96K31 380 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
LETMD1-234ENST00000552645 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 SMC3Q9UQE7 1217 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 SYNRGQ9UMZ2 1314 aa11.32□□□□□ -0.6
LETMD1-234ENST00000552645 KBTBD13C9JR72 458 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 RGS20O76081 388 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 ARIH2O95376 493 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 BEX3Q00994 111 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 KRT40Q6A162 431 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 RNF180Q86T96 592 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 OR6J1Q8NGC5 347 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 CCDC39Q9UFE4 941 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 GJB2P29033 226 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 KRT2P35908 639 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 SREBF1P36956 1147 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 LRRC41Q15345 812 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 GALNT17Q6IS24 598 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 NLRX1Q86UT6 975 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 FERMT2Q96AC1 680 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
LETMD1-234ENST00000552645 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-234ENST00000552645 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 STAM2O75886 525 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 MMP1P03956 469 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 ITGB5P18084 799 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 SP4Q02446 784 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 NR5A1Q13285 461 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 MTMR1Q13613 665 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 SAFBQ15424 915 aaKnown RBP eCLIP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 NPY5RQ15761 445 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 TEX2Q8IWB9 1127 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 FAM177A1Q8N128 213 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 MYRIPQ8NFW9 859 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
LETMD1-234ENST00000552645 INPP4AQ96PE3 977 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
LETMD1-234ENST00000552645 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 DNM1LO00429 736 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 FIBPO43427 364 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 GGPS1O95749 300 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 GH1P01241 217 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 GJA9P57773 515 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
LETMD1-234ENST00000552645 KCNA10Q16322 511 aa11.29□□□□□ -0.6
LETMD1-234ENST00000552645 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms