RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 COL4A4P53420 1690 aaPredicted RBP6.46□□□□□ -1.37
HOXB3-213ENST00000552000 CYP2D7A0A087X1C5 515 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 KIF28PB7ZC32 967 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 DYNC1LI2O43237 492 aaPredicted RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 ANP32CO43423 234 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 SURF6O75683 361 aaKnown RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 F12P00748 615 aaPredicted RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 CYP2C9P11712 490 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 PDE6AP16499 860 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 CDK8P49336 464 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 NKX3-2P78367 333 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 TLK2Q86UE8 772 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 FAM178BQ8IXR5 827 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 ANKRD35Q8N283 1001 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 GALNT6Q8NCL4 622 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 GDPD5Q8WTR4 605 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 EAF2Q96CJ1 260 aaPredicted RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 KATNBL1Q9H079 304 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 AP5M1Q9H0R1 490 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 UBE2ZQ9H832 354 aaPredicted RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 RAVER2Q9HCJ3 691 aaKnown RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 GOPCQ9HD26 462 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 ENAMQ9NRM1 1142 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 TRMT13Q9NUP7 481 aaKnown RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 TNNQ9UQP3 1299 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 MAP4K5Q9Y4K4 846 aa6.46□□□□□ -1.38
HOXB3-213ENST00000552000 CTDP1Q9Y5B0 961 aaPredicted RBP6.46□□□□□ -1.38
HOXB3-213ENST00000552000 MYO10Q9HD67 2058 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 SLC35F4A4IF30 521 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 PRKAB2O43741 272 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ZEB2O60315 1214 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ZBED4O75132 1171 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 BCAR3O75815 825 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 PFKMP08237 780 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ACTN1P12814 892 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ALADP13716 330 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 IL9P15248 144 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 KCNA5P22460 613 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 CNTN2Q02246 1040 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 SLC9C2Q5TAH2 1124 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 TMED8Q6PL24 325 aaPredicted RBP6.45□□□□□ -1.38
HOXB3-213ENST00000552000 HERC6Q8IVU3 1022 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 LCORLQ8N3X6 602 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ARMC2Q8NEN0 867 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 CCDC17Q96LX7 622 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 FTOQ9C0B1 505 aaKnown RBP eCLIP6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ALDH8A1Q9H2A2 487 aaPredicted RBP6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ARMT1Q9H993 441 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 KANSL2Q9H9L4 492 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 HOMER2Q9NSB8 354 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 GNEQ9Y223 722 aaKnown RBP6.45□□□□□ -1.38
HOXB3-213ENST00000552000 DDX49Q9Y6V7 483 aaKnown RBP6.45□□□□□ -1.38
HOXB3-213ENST00000552000 MICAL3Q7RTP6 2002 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 TNKSO95271 1327 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 ZNF532Q9HCE3 1301 aa6.45□□□□□ -1.38
HOXB3-213ENST00000552000 SIP14410 1827 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 LCHNA4D1U4 455 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 SPINT1O43278 529 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 DCXO43602 365 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 CT47B1P0C2W7 299 aaPredicted RBP6.44□□□□□ -1.38
HOXB3-213ENST00000552000 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
HOXB3-213ENST00000552000 LEXMQ3ZCV2 418 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 TMEM63BQ5T3F8 832 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 EEPD1Q7L9B9 569 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 FAM133AQ8N9E0 248 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 PRPF38AQ8NAV1 312 aaKnown RBP6.44□□□□□ -1.38
HOXB3-213ENST00000552000 CHST13Q8NET6 341 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.44□□□□□ -1.38
HOXB3-213ENST00000552000 PHOSPHO2Q8TCD6 241 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 SSH3Q8TE77 659 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 PPP1R13LQ8WUF5 828 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 ANKS1AQ92625 1134 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 CLUAP1Q96AJ1 413 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 SEZ6LQ9BYH1 1024 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 PDGFCQ9NRA1 345 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 FBXO40Q9UH90 709 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 MTUS1Q9ULD2 1270 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 ATRXP46100 2492 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 ZNF536O15090 1300 aa6.44□□□□□ -1.38
HOXB3-213ENST00000552000 MAP1BP46821 2468 aaKnown RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 CHD6Q8TD26 2715 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 TANC1Q9C0D5 1861 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 CNOT1A5YKK6 2376 aaKnown RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 MYH7P12883 1935 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 GREB1LQ9C091 1923 aaPredicted RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 TCRBV5S4A2TA0A5A2 114 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 ASB14A6NK59 587 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 USP17L12C9JPN9 530 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 USP17L21D6R901 530 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 CFAP99D6REC4 459 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 F5H6K3 240 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 ATP2A1O14983 1001 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 MBD4O95243 580 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 NDUFB10O96000 172 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms