RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 EFCAB14O75071 495 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 CFBP00751 764 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 HDAC1Q13547 482 aaPredicted RBP25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 ASPRV1Q53RT3 343 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 CCDC178Q5BJE1 867 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 MYSM1Q5VVJ2 828 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 IQCA1Q86XH1 822 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 ENAHQ8N8S7 591 aaPredicted RBP25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 C17orf80Q9BSJ5 609 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 HCN4Q9Y3Q4 1203 aa25.26■■□□□ 1.63
SMARCD1-212ENST00000551966 B4E1Z4 1266 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 SORBS3O60504 671 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 PPFIA4O75335 1185 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 LGR5O75473 907 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 HSD17B4P51659 736 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 SP2Q02086 613 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 HSDL1Q3SXM5 330 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 STAG2Q8N3U4 1231 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 DBF4BQ8NFT6 615 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 INSL6Q9Y581 213 aa25.25■■□□□ 1.63
SMARCD1-212ENST00000551966 GHRHRQ02643 423 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 LEXMQ3ZCV2 418 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 FAM178BQ8IXR5 827 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 CRBNQ96SW2 442 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 PDCD2LQ9BRP1 358 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 C16orf70Q9BSU1 422 aa25.24■■□□□ 1.63
SMARCD1-212ENST00000551966 DHX16O60231 1041 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 PPP1R11O60927 126 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 PARP1P09874 1014 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 MYCLP12524 364 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 MFAP1P55081 439 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 HTRA4P83105 476 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 CELF3Q5SZQ8 465 aaKnown RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 STOX1Q6ZVD7 989 aa25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 ZFP91Q96JP5 570 aaPredicted RBP25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 OSBPL7Q9BZF2 842 aa25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 LNPKQ9C0E8 428 aa25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 SIP14410 1827 aa25.23■■□□□ 1.63
SMARCD1-212ENST00000551966 KCNA5P22460 613 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 NT5C2P49902 561 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 SERINC5Q86VE9 423 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 VSIG10LQ86VR7 867 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 FBXO22Q8NEZ5 403 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 SPATA33Q96N06 139 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 AMNQ9BXJ7 453 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 BCAS3Q9H6U6 928 aa25.22■■□□□ 1.63
SMARCD1-212ENST00000551966 BRWD1Q9NSI6 2320 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 RSPH10B2B2RC85 870 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 GGPS1O95749 300 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 RSPH10BP0C881 870 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 IL9P15248 144 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 THPOP40225 353 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 RRP1P56182 461 aaKnown RBP25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 GJD3Q8N144 294 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 IL31RAQ8NI17 732 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 GPKOWQ92917 476 aaPredicted RBP eCLIP25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 MTMR8Q96EF0 704 aa25.21■■□□□ 1.63
SMARCD1-212ENST00000551966 MYH6P13533 1939 aa25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 AMHP03971 560 aa25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 HOXA13P31271 388 aaPredicted RBP25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 PGM5Q15124 567 aa25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 PLEKHG4Q58EX7 1191 aa25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 CWC27Q6UX04 472 aaKnown RBP25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 MYOCDQ8IZQ8 938 aa25.2■■□□□ 1.62
SMARCD1-212ENST00000551966 EMSYQ7Z589 1322 aa25.19■■□□□ 1.62
SMARCD1-212ENST00000551966 KCNV1Q6PIU1 500 aa25.19■■□□□ 1.62
SMARCD1-212ENST00000551966 MAP3K20Q9NYL2 800 aaKnown RBP25.19■■□□□ 1.62
SMARCD1-212ENST00000551966 PCDHA1Q9Y5I3 950 aa25.19■■□□□ 1.62
SMARCD1-212ENST00000551966 KLRF2D3W0D1 207 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 UBA1P22314 1058 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 HOXC8P31273 242 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 SLC35G1Q2M3R5 365 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 EPC2Q52LR7 807 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 PTCRAQ6ISU1 281 aaPredicted RBP25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 PLEKHM2Q8IWE5 1019 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 MRPL38Q96DV4 380 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 RNPEPQ9H4A4 650 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 MAD2L2Q9UI95 211 aa25.18■■□□□ 1.62
SMARCD1-212ENST00000551966 C17orf102A2RUQ5 167 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 GRXCR2A6NFK2 248 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 TREHO43280 583 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 TGFB3P10600 412 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 NEK9Q8TD19 979 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 ATP6V0A1Q93050 837 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 TOP1MTQ969P6 601 aa25.17■■□□□ 1.62
SMARCD1-212ENST00000551966 LAMA4Q16363 1823 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 H3BRB1 525 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 ZBTB5O15062 677 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 SEC23AQ15436 765 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 DSCC1Q9BVC3 393 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 KRT23Q9C075 422 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 OSBPL3Q9H4L5 887 aa25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 TUT1Q9H6E5 874 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-212ENST00000551966 MICAL3Q7RTP6 2002 aa25.15■■□□□ 1.62
SMARCD1-212ENST00000551966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-212ENST00000551966 PALM3A6NDB9 673 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-212ENST00000551966 H3BNC9 293 aa25.15■■□□□ 1.62
SMARCD1-212ENST00000551966 SMIM10L2AP0DMW4 78 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms