RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CCDC40Q4G0X9 1142 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 CUL5Q93034 780 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 MXD3Q9BW11 206 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 USP21Q9UK80 565 aa14.44□□□□□ -0.1
CACNB3-219ENST00000551544 GYS1P13807 737 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 GFPT1Q06210 699 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 TDRD12Q587J7 1177 aaKnown RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 IQCEQ6IPM2 695 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 CREG2Q8IUH2 290 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 NELFCDQ8IXH7 590 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 BAP1Q92560 729 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 LRRC27Q9C0I9 530 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 FAM204AQ9H8W3 233 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 MED4Q9NPJ6 270 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 SMARCAL1Q9NZC9 954 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 HPCAL4Q9UM19 191 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 PCDHA12Q9UN75 941 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 RNF40O75150 1001 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 RPS6KA5O75582 802 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 SCNN1DP51172 638 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 NAP1L1P55209 391 aaKnown RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 PSMD2Q13200 908 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 EZH2Q15910 746 aaKnown RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 PPP4R3AQ6IN85 833 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 SRLQ86TD4 932 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-219ENST00000551544 DNAJC19Q96DA6 116 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 FGFBP2Q9BYJ0 223 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 PSTPIP2Q9H939 334 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
CACNB3-219ENST00000551544 IGKV6D-41A0A0C4DH26 115 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 E9PMD0 336 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 NCK2O43639 380 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 IVLP07476 585 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 MRPL12P52815 198 aaKnown RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 RASSF7Q02833 373 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 EHHADHQ08426 723 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 CCDC70Q6NSX1 233 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 CCNI2Q6ZMN8 369 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 VIPAS39Q9H9C1 493 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP40Q9NVE5 1235 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 PLIN4Q96Q06 1357 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 BUB1O43683 1085 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 SYF2O95926 243 aaKnown RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 KCNMA1Q12791 1236 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 HDAC7Q8WUI4 952 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 OSBPL9Q96SU4 736 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 CRACR2AQ9BSW2 395 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 SELENOOQ9BVL4 669 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 EHD2Q9NZN4 543 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 SALL4Q9UJQ4 1053 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 COL4A3BPQ9Y5P4 624 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 ABCB11O95342 1321 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L15C9J2P7 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L13C9JLJ4 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 BRD2P25440 801 aaKnown RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L24Q0WX57 530 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 GOLGA6L1Q8N7Z2 621 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-219ENST00000551544 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 EFCC1Q9HA90 598 aa14.42□□□□□ -0.1
CACNB3-219ENST00000551544 ZBTB5O15062 677 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 SLC1A4P43007 532 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 CLK2P49760 499 aaKnown RBP14.41□□□□□ -0.1
CACNB3-219ENST00000551544 APBA1Q02410 837 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 CCDC181Q5TID7 509 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 TMC4Q7Z404 712 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 CERS5Q8N5B7 392 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 TOM1O60784 492 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 LCA5LO95447 670 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 SHMT1P34896 483 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 ENOX2Q16206 610 aaKnown RBP14.41□□□□□ -0.1
CACNB3-219ENST00000551544 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 SPATA4Q8NEY3 305 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 HYOU1Q9Y4L1 999 aa14.41□□□□□ -0.1
CACNB3-219ENST00000551544 POTEB3A0JP26 581 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 POTECB2RU33 542 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 GGCXP38435 758 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms