RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ZNF576Q9H609 170 aa18.4■□□□□ 0.54
COX6A1-203ENST00000550009 FRMPD4Q14CM0 1322 aa18.4■□□□□ 0.54
COX6A1-203ENST00000550009 MICAL3Q7RTP6 2002 aa18.4■□□□□ 0.54
COX6A1-203ENST00000550009 HAS3O00219 553 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 KPNA6O60684 536 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 ARHGEF15O94989 841 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 CCND2P30279 289 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
COX6A1-203ENST00000550009 MFSD10Q14728 455 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 DGKDQ16760 1214 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
COX6A1-203ENST00000550009 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 PPTC7Q8NI37 304 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 EMID1Q96A84 441 aaPredicted RBP18.39■□□□□ 0.53
COX6A1-203ENST00000550009 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
COX6A1-203ENST00000550009 TMEM87BQ96K49 555 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 SPATA33Q96N06 139 aa18.39■□□□□ 0.53
COX6A1-203ENST00000550009 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 LIFRP42702 1097 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
COX6A1-203ENST00000550009 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 C16orf70Q9BSU1 422 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 OSBPL7Q9BZF2 842 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 PRDM6Q9NQX0 595 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
COX6A1-203ENST00000550009 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 WDR81Q562E7 1941 aa18.38■□□□□ 0.53
COX6A1-203ENST00000550009 ADAMTS3O15072 1205 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 F2P00734 622 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 SUPT20HL2P0C7V6 817 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 HOXD8P13378 290 aaPredicted RBP18.37■□□□□ 0.53
COX6A1-203ENST00000550009 FOSL2P15408 326 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
COX6A1-203ENST00000550009 LAMC2Q13753 1193 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 ADGRE1Q14246 886 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 SPRED2Q7Z698 418 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 FANCBQ8NB91 859 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 SEZ6LQ9BYH1 1024 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 CNTNAP5Q8WYK1 1306 aa18.37■□□□□ 0.53
COX6A1-203ENST00000550009 DLL1O00548 723 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 CDC45O75419 566 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 KIF5BP33176 963 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 SP4Q02446 784 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 FUT2Q10981 343 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 TRIM71Q2Q1W2 868 aaKnown RBP18.36■□□□□ 0.53
COX6A1-203ENST00000550009 TRAF7Q6Q0C0 670 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 CYFIP1Q7L576 1253 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 SESTD1Q86VW0 696 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
COX6A1-203ENST00000550009 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
COX6A1-203ENST00000550009 FAM217BQ9NTX9 383 aaPredicted RBP18.36■□□□□ 0.53
COX6A1-203ENST00000550009 COL4A4P53420 1690 aaPredicted RBP18.35■□□□□ 0.53
COX6A1-203ENST00000550009 SPATA31C2B4DYI2 1134 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 NBNO60934 754 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 ATP9AO75110 1047 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 CDC27P30260 824 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
COX6A1-203ENST00000550009 MBTPS1Q14703 1052 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 SGMS1Q86VZ5 419 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 NOD1Q9Y239 953 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 SLC4A7Q9Y6M7 1214 aa18.35■□□□□ 0.53
COX6A1-203ENST00000550009 TCF20Q9UGU0 1960 aaKnown RBP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 RFXAPO00287 272 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 LGALS2P05162 132 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 CKBP12277 381 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 SMARCA1P28370 1054 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 WWC2Q6AWC2 1192 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 RPUSD2Q8IZ73 545 aaKnown RBP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 FTOQ9C0B1 505 aaKnown RBP eCLIP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 CERS4Q9HA82 394 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
COX6A1-203ENST00000550009 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 PRRC2BQ5JSZ5 2229 aaKnown RBP18.34■□□□□ 0.53
COX6A1-203ENST00000550009 TMEM265A0A087WTH1 108 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 EPOPA6NHQ4 379 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 PIK3CDO00329 1044 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
COX6A1-203ENST00000550009 ITGB5P18084 799 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 ICAM3P32942 547 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.52
COX6A1-203ENST00000550009 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
COX6A1-203ENST00000550009 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms