RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 COL6A3P12111 3177 aa16.89■□□□□ 0.3
LINC00661-203ENST00000549131 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 TGFB3P10600 412 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
LINC00661-203ENST00000549131 NAPAP54920 295 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 SP2Q02086 613 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 PCNX4Q63HM2 1172 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 WWC2Q6AWC2 1192 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 Q6ZUG5 572 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 ZNF365Q70YC5 407 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 C16orf59Q7L2K0 433 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 KCNB2Q92953 911 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 BRF1Q92994 677 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 INPP4AQ96PE3 977 aaPredicted RBP16.89■□□□□ 0.29
LINC00661-203ENST00000549131 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 KATNAL1Q9BW62 490 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 MLXIPQ9HAP2 919 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 RTEL1Q9NZ71 1219 aa16.89■□□□□ 0.29
LINC00661-203ENST00000549131 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
LINC00661-203ENST00000549131 FIBPO43427 364 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 F2P00734 622 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
LINC00661-203ENST00000549131 PSEN2P49810 448 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 RCAN1P53805 252 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 MFSD10Q14728 455 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 PTGISQ16647 500 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 KIAA0753Q2KHM9 967 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 HSDL1Q3SXM5 330 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 C7orf31Q8N865 590 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 MTMR10Q9NXD2 777 aa16.88■□□□□ 0.29
LINC00661-203ENST00000549131 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 PSMA5P28066 241 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 CDC27P30260 824 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 FAM109BQ6ICB4 259 aaPredicted RBP16.87■□□□□ 0.29
LINC00661-203ENST00000549131 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
LINC00661-203ENST00000549131 PPP1R18Q6NYC8 613 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 XRRA1Q6P2D8 792 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 MTIF3Q9H2K0 278 aaKnown RBP16.87■□□□□ 0.29
LINC00661-203ENST00000549131 EHMT1Q9H9B1 1298 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 TET1Q8NFU7 2136 aa16.87■□□□□ 0.29
LINC00661-203ENST00000549131 PTPRSQ13332 1948 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 SPATA31C2B4DYI2 1134 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 hCG_1984214I3L0E3 225 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 FGBP02675 491 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 HOXD8P13378 290 aaPredicted RBP16.86■□□□□ 0.29
LINC00661-203ENST00000549131 ICAM3P32942 547 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 ADCY7P51828 1080 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 SP4Q02446 784 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 FUT2Q10981 343 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 SEMA3FQ13275 785 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 BFSP2Q13515 415 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 NEDD9Q14511 834 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 CYFIP1Q7L576 1253 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 NLRX1Q86UT6 975 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 SESTD1Q86VW0 696 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
LINC00661-203ENST00000549131 ZNF713Q8N859 430 aaPredicted RBP16.86■□□□□ 0.29
LINC00661-203ENST00000549131 RETREG2Q8NC44 543 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 HDAC6Q9UBN7 1215 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 GTF2IRD1Q9UHL9 959 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
LINC00661-203ENST00000549131 NID2Q14112 1375 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
LINC00661-203ENST00000549131 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
LINC00661-203ENST00000549131 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
LINC00661-203ENST00000549131 STXBP3O00186 592 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 PPFIA4O75335 1185 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 DNAJB2P25686 324 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 RASIP1Q5U651 963 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 TYW1BQ6NUM6 668 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 METTL7BQ6UX53 244 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 HERVK_113Q902F9 699 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 GUCD1Q96NT3 240 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
LINC00661-203ENST00000549131 PCDHA6Q9UN73 950 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 PCDHA8Q9Y5H6 950 aa16.85■□□□□ 0.29
LINC00661-203ENST00000549131 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 HAS3O00219 553 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 LGALS2P05162 132 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 PFKMP08237 780 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 ADD1P35611 737 aaKnown RBP16.84■□□□□ 0.29
LINC00661-203ENST00000549131 CAGE1Q8TC20 777 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 GPRASP2Q96D09 838 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 PGBD1Q96JS3 809 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 CTAGE1Q96RT6 745 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 RIC8AQ9NPQ8 531 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 BARHL2Q9NY43 387 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 PKD2L1Q9P0L9 805 aa16.84■□□□□ 0.29
LINC00661-203ENST00000549131 CXXC1Q9P0U4 656 aaPredicted RBP16.84■□□□□ 0.29
LINC00661-203ENST00000549131 GRXCR1A8MXD5 290 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms