RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MYZAPP0CAP1 466 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 TECP42680 631 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 CCDC121Q6ZUS5 278 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 CEP72Q9P209 647 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
NPAS3-206ENST00000548645 CASZ1Q86V15 1759 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 RASSF9O75901 435 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 HPDP32754 393 aaPredicted RBP25.46■■□□□ 1.67
NPAS3-206ENST00000548645 CDR1P51861 262 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 ZKSCAN4Q969J2 545 aaPredicted RBP25.46■■□□□ 1.67
NPAS3-206ENST00000548645 NSUN4Q96CB9 384 aaKnown RBP25.46■■□□□ 1.67
NPAS3-206ENST00000548645 CYFIP2Q96F07 1278 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 MAD2L2Q9UI95 211 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 PCDHGC5Q9Y5F6 944 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 TSG101Q99816 390 aa25.46■■□□□ 1.67
NPAS3-206ENST00000548645 PPANQ9NQ55 473 aaKnown RBP25.46■■□□□ 1.67
NPAS3-206ENST00000548645 GOLGA6L7A0A1B0GV03 622 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 RAD51CO43502 376 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 TFAP4Q01664 338 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 NONOQ15233 471 aaKnown RBP eCLIP25.45■■□□□ 1.67
NPAS3-206ENST00000548645 USP38Q8NB14 1042 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 MMTAG2Q9BU76 263 aaKnown RBP25.45■■□□□ 1.67
NPAS3-206ENST00000548645 ISCUQ9H1K1 167 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 CD248Q9HCU0 757 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 NLRC4Q9NPP4 1024 aa25.45■■□□□ 1.67
NPAS3-206ENST00000548645 ZPR1O75312 459 aa25.45■■□□□ 1.66
NPAS3-206ENST00000548645 HOXA7P31268 230 aaPredicted RBP25.45■■□□□ 1.66
NPAS3-206ENST00000548645 LRRC55Q6ZSA7 311 aa25.45■■□□□ 1.66
NPAS3-206ENST00000548645 ANKS1AQ92625 1134 aa25.45■■□□□ 1.66
NPAS3-206ENST00000548645 ADAMTS2O95450 1211 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 EHHADHQ08426 723 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 HLTFQ14527 1009 aaKnown RBP eCLIP25.44■■□□□ 1.66
NPAS3-206ENST00000548645 TEX2Q8IWB9 1127 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 CENPHQ9H3R5 247 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 STK17AQ9UEE5 414 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 GMNCA6NCL1 334 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 MYBP10242 640 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 KLRC1P26715 233 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 KCNMA1Q12791 1236 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 TRADDQ15628 312 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 GIMAP7Q8NHV1 300 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 TAF4BQ92750 862 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 LRRC45Q96CN5 670 aa25.44■■□□□ 1.66
NPAS3-206ENST00000548645 MYMKA6NI61 221 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 NT5C2P49902 561 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 MECOMQ03112 1051 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 CUL1Q13616 776 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 NEDD9Q14511 834 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 CCDC114Q96M63 670 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 SLC40A1Q9NP59 571 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 RIC8AQ9NPQ8 531 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 IL17RBQ9NRM6 502 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 BCL9O00512 1426 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 NEK8Q86SG6 692 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 KLHL7Q8IXQ5 586 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 ZMYND12Q9H0C1 365 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 ATP6V0A2Q9Y487 856 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 CYTH3O43739 400 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 MMP14P50281 582 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 RNASE9P60153 205 aaKnown RBP25.43■■□□□ 1.66
NPAS3-206ENST00000548645 FAM83BQ5T0W9 1011 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 RUFY4Q6ZNE9 571 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 ITGB4P16144 1822 aa25.43■■□□□ 1.66
NPAS3-206ENST00000548645 CES2O00748 559 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 HSD17B3P37058 310 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 BIRC3Q13489 604 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 SLC18A3Q16572 532 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 SLC35G1Q2M3R5 365 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 FOXR2Q6PJQ5 311 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 TMEM59LQ9UK28 342 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 LAMB1P07942 1786 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 TLR2O60603 784 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 PREPLQ4J6C6 727 aaPredicted RBP25.42■■□□□ 1.66
NPAS3-206ENST00000548645 PROM2Q8N271 834 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 TBC1D5Q92609 795 aa25.42■■□□□ 1.66
NPAS3-206ENST00000548645 FAM84BQ96KN1 310 aaPredicted RBP25.42■■□□□ 1.66
NPAS3-206ENST00000548645 KIAA0753Q2KHM9 967 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 DYMQ7RTS9 669 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 LARP4BQ92615 738 aaKnown RBP25.41■■□□□ 1.66
NPAS3-206ENST00000548645 BLOC1S4Q9NUP1 217 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 DONSONQ9NYP3 566 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 PACSIN2Q9UNF0 486 aaPredicted RBP25.41■■□□□ 1.66
NPAS3-206ENST00000548645 ERCC3P19447 782 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 NAPAP54920 295 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 GRB10Q13322 594 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 CDK5RAP3Q96JB5 506 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 LZTS2Q9BRK4 669 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 MCM9Q9NXL9 1143 aa25.41■■□□□ 1.66
NPAS3-206ENST00000548645 PSMD2Q13200 908 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 ORC2Q13416 577 aaPredicted RBP25.4■■□□□ 1.66
NPAS3-206ENST00000548645 C6orf50Q9HD87 102 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 SLC12A6Q9UHW9 1150 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 WTIPA6NIX2 430 aaPredicted RBP25.4■■□□□ 1.66
NPAS3-206ENST00000548645 TRAPPC3O43617 180 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 NTSR2O95665 410 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 ERVK-9P63128 1117 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 DDX20Q9UHI6 824 aaKnown RBP25.4■■□□□ 1.66
NPAS3-206ENST00000548645 C21orf2O43822 256 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 KIF1CO43896 1103 aaKnown RBP25.4■■□□□ 1.66
NPAS3-206ENST00000548645 GNA11P29992 359 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms