RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 COPB2P35606 906 aa5.73□□□□□ -1.49
APP-217ENST00000548570 SREBF1P36956 1147 aa5.73□□□□□ -1.49
APP-217ENST00000548570 ANP32AP39687 249 aaKnown RBP5.73□□□□□ -1.49
APP-217ENST00000548570 FLT3LGP49771 235 aa5.73□□□□□ -1.49
APP-217ENST00000548570 ALDH5A1P51649 535 aaPredicted RBP5.73□□□□□ -1.49
APP-217ENST00000548570 LBX1P52954 281 aa5.73□□□□□ -1.49
APP-217ENST00000548570 NLRP5P59047 1200 aa5.73□□□□□ -1.49
APP-217ENST00000548570 CCNA1P78396 465 aa5.73□□□□□ -1.49
APP-217ENST00000548570 AKAP17AQ02040 695 aaKnown RBP5.73□□□□□ -1.49
APP-217ENST00000548570 MAP2K5Q13163 448 aa5.73□□□□□ -1.49
APP-217ENST00000548570 SEMA3FQ13275 785 aa5.73□□□□□ -1.49
APP-217ENST00000548570 BECN1Q14457 450 aa5.73□□□□□ -1.49
APP-217ENST00000548570 WDR78Q5VTH9 848 aa5.73□□□□□ -1.49
APP-217ENST00000548570 MAMDC4Q6UXC1 1216 aa5.73□□□□□ -1.49
APP-217ENST00000548570 TRIM67Q6ZTA4 783 aa5.73□□□□□ -1.49
APP-217ENST00000548570 OTOP1Q7RTM1 612 aa5.73□□□□□ -1.49
APP-217ENST00000548570 FERMT3Q86UX7 667 aa5.73□□□□□ -1.49
APP-217ENST00000548570 VSIG10LQ86VR7 867 aa5.73□□□□□ -1.49
APP-217ENST00000548570 FCHSD1Q86WN1 690 aa5.73□□□□□ -1.49
APP-217ENST00000548570 MCF2L2Q86YR7 1114 aa5.73□□□□□ -1.49
APP-217ENST00000548570 FAM177A1Q8N128 213 aaPredicted RBP5.73□□□□□ -1.49
APP-217ENST00000548570 ANKRD35Q8N283 1001 aa5.73□□□□□ -1.49
APP-217ENST00000548570 C4orf32Q8N8J7 132 aa5.73□□□□□ -1.49
APP-217ENST00000548570 TRIB2Q92519 343 aa5.73□□□□□ -1.49
APP-217ENST00000548570 WASF1Q92558 559 aa5.73□□□□□ -1.49
APP-217ENST00000548570 CUL5Q93034 780 aa5.73□□□□□ -1.49
APP-217ENST00000548570 MAML3Q96JK9 1138 aa5.73□□□□□ -1.49
APP-217ENST00000548570 MBOAT7Q96N66 472 aa5.73□□□□□ -1.49
APP-217ENST00000548570 PDCD2LQ9BRP1 358 aa5.73□□□□□ -1.49
APP-217ENST00000548570 FTOQ9C0B1 505 aaKnown RBP eCLIP5.73□□□□□ -1.49
APP-217ENST00000548570 MAF1Q9H063 256 aa5.73□□□□□ -1.49
APP-217ENST00000548570 BCAS3Q9H6U6 928 aa5.73□□□□□ -1.49
APP-217ENST00000548570 C6orf50Q9HD87 102 aa5.73□□□□□ -1.49
APP-217ENST00000548570 PXMP2Q9NR77 195 aa5.73□□□□□ -1.49
APP-217ENST00000548570 SRRDQ9UH36 339 aa5.73□□□□□ -1.49
APP-217ENST00000548570 PNMA2Q9UL42 364 aa5.73□□□□□ -1.49
APP-217ENST00000548570 MRVI1Q9Y6F6 885 aa5.73□□□□□ -1.49
APP-217ENST00000548570 IGLV3-22A0A075B6J6 115 aa5.72□□□□□ -1.49
APP-217ENST00000548570 VPS37CA5D8V6 355 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 SLC37A4O43826 429 aa5.72□□□□□ -1.49
APP-217ENST00000548570 ARIH2O95376 493 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TDP2O95551 362 aa5.72□□□□□ -1.49
APP-217ENST00000548570 NR3C2P08235 984 aa5.72□□□□□ -1.49
APP-217ENST00000548570 CYP3A4P08684 503 aa5.72□□□□□ -1.49
APP-217ENST00000548570 ZNF865P0CJ78 1059 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 ZSCAN22P10073 491 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 EIF2AK2P19525 551 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 CYP2B6P20813 491 aa5.72□□□□□ -1.49
APP-217ENST00000548570 GNA11P29992 359 aa5.72□□□□□ -1.49
APP-217ENST00000548570 CIITAP33076 1130 aa5.72□□□□□ -1.49
APP-217ENST00000548570 CYP2C19P33261 490 aa5.72□□□□□ -1.49
APP-217ENST00000548570 KRT2P35908 639 aa5.72□□□□□ -1.49
APP-217ENST00000548570 MRPL12P52815 198 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 FCGRTP55899 365 aa5.72□□□□□ -1.49
APP-217ENST00000548570 ARHGAP4P98171 946 aa5.72□□□□□ -1.49
APP-217ENST00000548570 SP2Q02086 613 aa5.72□□□□□ -1.49
APP-217ENST00000548570 AP3B2Q13367 1082 aa5.72□□□□□ -1.49
APP-217ENST00000548570 IRF5Q13568 498 aa5.72□□□□□ -1.49
APP-217ENST00000548570 KCTD2Q14681 263 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PGM5Q15124 567 aa5.72□□□□□ -1.49
APP-217ENST00000548570 IL17AQ16552 155 aa5.72□□□□□ -1.49
APP-217ENST00000548570 INF2Q27J81 1249 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PRAMEF19Q5SWL8 479 aa5.72□□□□□ -1.49
APP-217ENST00000548570 MAP3K21Q5TCX8 1036 aa5.72□□□□□ -1.49
APP-217ENST00000548570 FOXD4L5Q5VV16 416 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 GALNT17Q6IS24 598 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TAPT1Q6NXT6 567 aa5.72□□□□□ -1.49
APP-217ENST00000548570 BLOC1S3Q6QNY0 202 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PADI6Q6TGC4 694 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TREML4Q6UXN2 200 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PIK3AP1Q6ZUJ8 805 aa5.72□□□□□ -1.49
APP-217ENST00000548570 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TEX2Q8IWB9 1127 aa5.72□□□□□ -1.49
APP-217ENST00000548570 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 SAMD3Q8N6K7 520 aa5.72□□□□□ -1.49
APP-217ENST00000548570 FAM184AQ8NB25 1140 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TTC13Q8NBP0 860 aa5.72□□□□□ -1.49
APP-217ENST00000548570 CCDC148Q8NFR7 591 aa5.72□□□□□ -1.49
APP-217ENST00000548570 TBCKQ8TEA7 893 aa5.72□□□□□ -1.49
APP-217ENST00000548570 FOXD4L4Q8WXT5 416 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 GJA10Q969M2 543 aa5.72□□□□□ -1.49
APP-217ENST00000548570 RMDN3Q96TC7 470 aa5.72□□□□□ -1.49
APP-217ENST00000548570 FOXP1Q9H334 677 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 CDHR5Q9HBB8 845 aa5.72□□□□□ -1.49
APP-217ENST00000548570 CWC22Q9HCG8 908 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 PDGFCQ9NRA1 345 aa5.72□□□□□ -1.49
APP-217ENST00000548570 MAP3K20Q9NYL2 800 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 DIS3Q9Y2L1 958 aaKnown RBP5.72□□□□□ -1.49
APP-217ENST00000548570 CTDP1Q9Y5B0 961 aaPredicted RBP5.72□□□□□ -1.49
APP-217ENST00000548570 UBIAD1Q9Y5Z9 338 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PTCH2Q9Y6C5 1203 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PFASO15067 1338 aa5.72□□□□□ -1.49
APP-217ENST00000548570 PARP14Q460N5 1801 aa5.71□□□□□ -1.49
APP-217ENST00000548570 CYP3A7-CYP3A51PA0A087WV96 503 aa5.71□□□□□ -1.5
APP-217ENST00000548570 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.71□□□□□ -1.5
APP-217ENST00000548570 RBM47A0AV96 593 aaKnown RBP5.71□□□□□ -1.5
APP-217ENST00000548570 MEIS1O00470 390 aa5.71□□□□□ -1.5
APP-217ENST00000548570 DHX15O43143 795 aaKnown RBP5.71□□□□□ -1.5
APP-217ENST00000548570 ATP9AO75110 1047 aa5.71□□□□□ -1.5
APP-217ENST00000548570 NR1I2O75469 434 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms